Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.08■□□□□ 0.64
GABRA4P48169 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.08■□□□□ 0.64
GABRA4P48169 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GABRA4P48169 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.08■□□□□ 0.64
GABRA4P48169 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.08■□□□□ 0.64
GABRA4P48169 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.08■□□□□ 0.64
GABRA4P48169 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.08■□□□□ 0.64
GABRA4P48169 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.08■□□□□ 0.64
GABRA4P48169 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GABRA4P48169 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.08■□□□□ 0.64
GABRA4P48169 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GABRA4P48169 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
GABRA4P48169 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GABRA4P48169 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.07■□□□□ 0.64
GABRA4P48169 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
GABRA4P48169 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.07■□□□□ 0.64
GABRA4P48169 UBE2SP1-201ENST00000450587 669 ntBASIC19.07■□□□□ 0.64
GABRA4P48169 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.07■□□□□ 0.64
GABRA4P48169 AC093827.2-201ENST00000512654 315 ntBASIC19.07■□□□□ 0.64
GABRA4P48169 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.07■□□□□ 0.64
GABRA4P48169 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.07■□□□□ 0.64
GABRA4P48169 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
GABRA4P48169 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.07■□□□□ 0.64
GABRA4P48169 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.07■□□□□ 0.64
GABRA4P48169 AC124016.1-201ENST00000609552 612 ntBASIC19.07■□□□□ 0.64
GABRA4P48169 AL121829.2-201ENST00000620908 328 ntBASIC19.07■□□□□ 0.64
GABRA4P48169 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GABRA4P48169 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
GABRA4P48169 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.06■□□□□ 0.64
GABRA4P48169 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.06■□□□□ 0.64
GABRA4P48169 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.06■□□□□ 0.64
GABRA4P48169 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.06■□□□□ 0.64
GABRA4P48169 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
GABRA4P48169 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.06■□□□□ 0.64
GABRA4P48169 AL023875.1-201ENST00000640777 796 ntBASIC19.06■□□□□ 0.64
GABRA4P48169 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GABRA4P48169 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
GABRA4P48169 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.05■□□□□ 0.64
GABRA4P48169 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.05■□□□□ 0.64
GABRA4P48169 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.05■□□□□ 0.64
GABRA4P48169 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.05■□□□□ 0.64
GABRA4P48169 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.05■□□□□ 0.64
GABRA4P48169 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.05■□□□□ 0.64
GABRA4P48169 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
GABRA4P48169 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.05■□□□□ 0.64
GABRA4P48169 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GABRA4P48169 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.05■□□□□ 0.64
GABRA4P48169 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GABRA4P48169 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
GABRA4P48169 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.04■□□□□ 0.64
GABRA4P48169 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRA4P48169 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.04■□□□□ 0.64
GABRA4P48169 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRA4P48169 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
GABRA4P48169 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRA4P48169 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRA4P48169 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRA4P48169 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.04■□□□□ 0.64
GABRA4P48169 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.04■□□□□ 0.64
GABRA4P48169 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.04■□□□□ 0.64
GABRA4P48169 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.04■□□□□ 0.64
GABRA4P48169 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.04■□□□□ 0.64
GABRA4P48169 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRA4P48169 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.04■□□□□ 0.64
GABRA4P48169 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABRA4P48169 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.04■□□□□ 0.64
GABRA4P48169 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms