Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 YNL319WYNL319W 441 nt-1.47□□□□□ -2.64
TRA1P38811 YOL118CYOL118C 309 nt-1.47□□□□□ -2.65
TRA1P38811 YLL006W-AYLL006W-A 177 nt-1.48□□□□□ -2.65
TRA1P38811 SNU13YEL026W 381 nt-1.49□□□□□ -2.65
TRA1P38811 YMR254CYMR254C 309 nt-1.49□□□□□ -2.65
TRA1P38811 ATG31YDR022C 591 nt-1.5□□□□□ -2.65
TRA1P38811 RPL42BYHR141C 321 nt-1.5□□□□□ -2.65
TRA1P38811 ZIP2YGL249W 2115 nt-1.5□□□□□ -2.65
TRA1P38811 YHR130CYHR130C 336 nt-1.51□□□□□ -2.65
TRA1P38811 YNL089CYNL089C 477 nt-1.52□□□□□ -2.65
TRA1P38811 YGL182CYGL182C 324 nt-1.52□□□□□ -2.65
TRA1P38811 YDL009CYDL009C 324 nt-1.52□□□□□ -2.65
TRA1P38811 YER084W-AYER084W-A 513 nt-1.53□□□□□ -2.65
TRA1P38811 TAN1YGL232W 870 nt-1.53□□□□□ -2.65
TRA1P38811 YOL029CYOL029C 606 nt-1.53□□□□□ -2.65
TRA1P38811 YLR171WYLR171W 390 nt-1.54□□□□□ -2.66
TRA1P38811 YHL041WYHL041W 450 nt-1.54□□□□□ -2.66
TRA1P38811 YMR075C-AYMR075C-A 366 nt-1.54□□□□□ -2.66
TRA1P38811 YIL002W-AYIL002W-A 210 nt-1.55□□□□□ -2.66
TRA1P38811 YJL020W-AYJL020W-A 258 nt-1.55□□□□□ -2.66
TRA1P38811 PSF2YJL072C 642 nt-1.55□□□□□ -2.66
TRA1P38811 YNL144W-AYNL144W-A 84 nt-1.55□□□□□ -2.66
TRA1P38811 YBR099CYBR099C 384 nt-1.55□□□□□ -2.66
TRA1P38811 PAN3YKL025C 2040 nt-1.56□□□□□ -2.66
TRA1P38811 YOR293C-AYOR293C-A 150 nt-1.56□□□□□ -2.66
TRA1P38811 IST3YIR005W 447 nt-1.57□□□□□ -2.66
TRA1P38811 ARV1YLR242C 966 nt-1.57□□□□□ -2.66
TRA1P38811 BER1YLR412W 825 nt-1.58□□□□□ -2.66
TRA1P38811 YFR057WYFR057W 456 nt-1.58□□□□□ -2.66
TRA1P38811 SPO74YGL170C 1242 nt-1.58□□□□□ -2.66
TRA1P38811 FAR3YMR052W 615 nt-1.58□□□□□ -2.66
TRA1P38811 PEX15YOL044W 1152 nt-1.58□□□□□ -2.66
TRA1P38811 RSM23YGL129C 1353 nt-1.58□□□□□ -2.66
TRA1P38811 YDR194W-AYDR194W-A 153 nt-1.6□□□□□ -2.67
TRA1P38811 YJR162CYJR162C 351 nt-1.6□□□□□ -2.67
TRA1P38811 YNL337WYNL337W 255 nt-1.6□□□□□ -2.67
TRA1P38811 LIN1YHR156C 1023 nt-1.61□□□□□ -2.67
TRA1P38811 COX8YLR395C 237 nt-1.61□□□□□ -2.67
TRA1P38811 YMR153C-AYMR153C-A 336 nt-1.61□□□□□ -2.67
TRA1P38811 MFA2YNL145W 117 nt-1.61□□□□□ -2.67
TRA1P38811 IRC16YPR038W 360 nt-1.61□□□□□ -2.67
TRA1P38811 YNL067W-AYNL067W-A 147 nt-1.61□□□□□ -2.67
TRA1P38811 YFR012W-AYFR012W-A 87 nt-1.61□□□□□ -2.67
TRA1P38811 YIL029CYIL029C 429 nt-1.61□□□□□ -2.67
TRA1P38811 CBS1YDL069C 690 nt-1.62□□□□□ -2.67
TRA1P38811 YML100W-AYML100W-A 174 nt-1.62□□□□□ -2.67
TRA1P38811 YDR199WYDR199W 366 nt-1.62□□□□□ -2.67
TRA1P38811 YER076W-AYER076W-A 348 nt-1.62□□□□□ -2.67
TRA1P38811 AEP1YMR064W 1557 nt-1.63□□□□□ -2.67
TRA1P38811 YLR198CYLR198C 360 nt-1.63□□□□□ -2.67
TRA1P38811 YDL152WYDL152W 366 nt-1.64□□□□□ -2.67
TRA1P38811 MVB12YGR206W 306 nt-1.65□□□□□ -2.67
TRA1P38811 YHR028W-AYHR028W-A 321 nt-1.66□□□□□ -2.67
TRA1P38811 YPR016W-AYPR016W-A 261 nt-1.66□□□□□ -2.67
TRA1P38811 TDA2YER071C 381 nt-1.66□□□□□ -2.68
TRA1P38811 tN(GUU)QtN(GUU)Q 71 nt-1.67□□□□□ -2.68
TRA1P38811 ATX1YNL259C 222 nt-1.67□□□□□ -2.68
TRA1P38811 YKL065W-AYKL065W-A 222 nt-1.69□□□□□ -2.68
TRA1P38811 YLR271WYLR271W 825 nt-1.7□□□□□ -2.68
TRA1P38811 YER135CYER135C 393 nt-1.72□□□□□ -2.68
TRA1P38811 YHL012WYHL012W 1482 nt-1.72□□□□□ -2.69
TRA1P38811 YHL046W-AYHL046W-A 327 nt-1.74□□□□□ -2.69
TRA1P38811 PBI2YNL015W 228 nt-1.74□□□□□ -2.69
TRA1P38811 YLR154W-FYLR154W-F 141 nt-1.74□□□□□ -2.69
TRA1P38811 SDH7YDR511W 402 nt-1.76□□□□□ -2.69
TRA1P38811 LRP1YHR081W 555 nt-1.77□□□□□ -2.69
TRA1P38811 GIC2YDR309C 1152 nt-1.77□□□□□ -2.69
TRA1P38811 RPS20YHL015W 366 nt-1.77□□□□□ -2.69
TRA1P38811 YBR064WYBR064W 429 nt-1.77□□□□□ -2.69
TRA1P38811 YMR307C-AYMR307C-A 195 nt-1.77□□□□□ -2.69
TRA1P38811 YGL042CYGL042C 306 nt-1.78□□□□□ -2.69
TRA1P38811 snR49snR49 165 nt-1.78□□□□□ -2.69
TRA1P38811 SCEIQ0160 708 nt-1.78□□□□□ -2.69
TRA1P38811 ACF4YJR083C 930 nt-1.79□□□□□ -2.7
TRA1P38811 YPR142CYPR142C 564 nt-1.79□□□□□ -2.7
TRA1P38811 YHR145CYHR145C 357 nt-1.79□□□□□ -2.7
TRA1P38811 MFA1YDR461W 111 nt-1.8□□□□□ -2.7
TRA1P38811 YML108WYML108W 318 nt-1.8□□□□□ -2.7
TRA1P38811 YOR366WYOR366W 354 nt-1.81□□□□□ -2.7
TRA1P38811 AGA2YGL032C 264 nt-1.82□□□□□ -2.7
TRA1P38811 snR189snR189 189 nt-1.82□□□□□ -2.7
TRA1P38811 YER158W-AYER158W-A 216 nt-1.82□□□□□ -2.7
TRA1P38811 YGR204C-AYGR204C-A 114 nt-1.83□□□□□ -2.7
TRA1P38811 YMR290W-AYMR290W-A 348 nt-1.83□□□□□ -2.7
TRA1P38811 snR81snR81 201 nt-1.83□□□□□ -2.7
TRA1P38811 YAP6YDR259C 1152 nt-1.83□□□□□ -2.7
TRA1P38811 RUB1YDR139C 234 nt-1.83□□□□□ -2.7
TRA1P38811 YIR021W-AYIR021W-A 213 nt-1.83□□□□□ -2.7
TRA1P38811 YKL068W-AYKL068W-A 237 nt-1.83□□□□□ -2.7
TRA1P38811 YBR072C-AYBR072C-A 162 nt-1.86□□□□□ -2.71
TRA1P38811 THG1YGR024C 714 nt-1.87□□□□□ -2.71
TRA1P38811 LOC1YFR001W 615 nt-1.88□□□□□ -2.71
TRA1P38811 PET20YPL159C 762 nt-1.89□□□□□ -2.71
TRA1P38811 YDR008CYDR008C 351 nt-1.89□□□□□ -2.71
TRA1P38811 MRPL31YKL138C 396 nt-1.89□□□□□ -2.71
TRA1P38811 YKE2YLR200W 345 nt-1.89□□□□□ -2.71
TRA1P38811 snR77snR77 88 nt-1.9□□□□□ -2.71
TRA1P38811 YHR125WYHR125W 306 nt-1.9□□□□□ -2.71
TRA1P38811 YIR044CYIR044C 186 nt-1.9□□□□□ -2.71
TRA1P38811 YPL119C-AYPL119C-A 264 nt-1.9□□□□□ -2.71
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms