Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YAR047CYAR047C 321 nt0.64□□□□□ -2.31
SSH1P38353 RPS30BYOR182C 192 nt0.64□□□□□ -2.31
SSH1P38353 PKH2YOL100W 3246 nt0.64□□□□□ -2.31
SSH1P38353 PCF11YDR228C 1881 nt0.63□□□□□ -2.31
SSH1P38353 YJR011CYJR011C 786 nt0.63□□□□□ -2.31
SSH1P38353 BFR2YDR299W 1605 nt0.63□□□□□ -2.31
SSH1P38353 YDR521WYDR521W 336 nt0.62□□□□□ -2.31
SSH1P38353 INA22YIR024C 651 nt0.62□□□□□ -2.31
SSH1P38353 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
SSH1P38353 YIR044CYIR044C 186 nt0.61□□□□□ -2.31
SSH1P38353 CMC4YMR194C-B 222 nt0.61□□□□□ -2.31
SSH1P38353 YNL058CYNL058C 951 nt0.61□□□□□ -2.31
SSH1P38353 YBR064WYBR064W 429 nt0.61□□□□□ -2.31
SSH1P38353 YBR206WYBR206W 324 nt0.61□□□□□ -2.31
SSH1P38353 NOP9YJL010C 2001 nt0.6□□□□□ -2.31
SSH1P38353 PMP1YCR024C-A 123 nt0.6□□□□□ -2.31
SSH1P38353 MAM33YIL070C 801 nt0.6□□□□□ -2.31
SSH1P38353 YLR434CYLR434C 384 nt0.6□□□□□ -2.31
SSH1P38353 DBP6YNR038W 1890 nt0.6□□□□□ -2.31
SSH1P38353 YCK3YER123W 1575 nt0.59□□□□□ -2.31
SSH1P38353 OST1YJL002C 1431 nt0.59□□□□□ -2.31
SSH1P38353 YGR174W-AYGR174W-A 87 nt0.59□□□□□ -2.31
SSH1P38353 RPL38YLR325C 237 nt0.59□□□□□ -2.31
SSH1P38353 YLR456WYLR456W 615 nt0.59□□□□□ -2.31
SSH1P38353 IES4YOR189W 351 nt0.59□□□□□ -2.31
SSH1P38353 YPL185WYPL185W 396 nt0.59□□□□□ -2.31
SSH1P38353 LTE1YAL024C 4308 nt0.59□□□□□ -2.32
SSH1P38353 ASE1YOR058C 2658 nt0.58□□□□□ -2.32
SSH1P38353 YJL007CYJL007C 315 nt0.58□□□□□ -2.32
SSH1P38353 YOR072W-AYOR072W-A 249 nt0.58□□□□□ -2.32
SSH1P38353 tF(GAA)BtF(GAA)B 73 nt0.57□□□□□ -2.32
SSH1P38353 tF(GAA)FtF(GAA)F 73 nt0.57□□□□□ -2.32
SSH1P38353 tF(GAA)GtF(GAA)G 73 nt0.57□□□□□ -2.32
SSH1P38353 tF(GAA)H1tF(GAA)H1 73 nt0.57□□□□□ -2.32
SSH1P38353 tF(GAA)H2tF(GAA)H2 73 nt0.57□□□□□ -2.32
SSH1P38353 tF(GAA)MtF(GAA)M 73 nt0.57□□□□□ -2.32
SSH1P38353 tF(GAA)P1tF(GAA)P1 73 nt0.57□□□□□ -2.32
SSH1P38353 tF(GAA)P2tF(GAA)P2 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)BtT(AGU)B 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)CtT(AGU)C 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)DtT(AGU)D 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)HtT(AGU)H 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)I1tT(AGU)I1 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)I2tT(AGU)I2 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)JtT(AGU)J 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)N1tT(AGU)N1 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)N2tT(AGU)N2 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)O1tT(AGU)O1 73 nt0.57□□□□□ -2.32
SSH1P38353 tT(AGU)O2tT(AGU)O2 73 nt0.57□□□□□ -2.32
SSH1P38353 YLR406C-AYLR406C-A 150 nt0.57□□□□□ -2.32
SSH1P38353 CUL3YGR003W 2235 nt0.57□□□□□ -2.32
SSH1P38353 YLL007CYLL007C 1998 nt0.56□□□□□ -2.32
SSH1P38353 YPR002C-AYPR002C-A 198 nt0.56□□□□□ -2.32
SSH1P38353 MCM10YIL150C 1716 nt0.55□□□□□ -2.32
SSH1P38353 YIL142C-AYIL142C-A 333 nt0.55□□□□□ -2.32
SSH1P38353 YML007C-AYML007C-A 111 nt0.55□□□□□ -2.32
SSH1P38353 YOR282WYOR282W 321 nt0.55□□□□□ -2.32
SSH1P38353 YDR344CYDR344C 444 nt0.54□□□□□ -2.32
SSH1P38353 YDR426CYDR426C 378 nt0.54□□□□□ -2.32
SSH1P38353 CHS6YJL099W 2241 nt0.54□□□□□ -2.32
SSH1P38353 YML002WYML002W 2214 nt0.54□□□□□ -2.32
SSH1P38353 YSP1YHR155W 3687 nt0.53□□□□□ -2.33
SSH1P38353 OLI1Q0130 231 nt0.52□□□□□ -2.33
SSH1P38353 PAU12YGR294W 363 nt0.52□□□□□ -2.33
SSH1P38353 YHR063W-AYHR063W-A 336 nt0.52□□□□□ -2.33
SSH1P38353 YOR032W-AYOR032W-A 201 nt0.51□□□□□ -2.33
SSH1P38353 PTP2YOR208W 2253 nt0.51□□□□□ -2.33
SSH1P38353 PRM3YPL192C 402 nt0.51□□□□□ -2.33
SSH1P38353 ECM12YHR021W-A 456 nt0.5□□□□□ -2.33
SSH1P38353 YPL044CYPL044C 549 nt0.5□□□□□ -2.33
SSH1P38353 YPL205CYPL205C 345 nt0.5□□□□□ -2.33
SSH1P38353 UTP10YJL109C 5310 nt0.49□□□□□ -2.33
SSH1P38353 YER079WYER079W 633 nt0.49□□□□□ -2.33
SSH1P38353 QCR9YGR183C 201 nt0.49□□□□□ -2.33
SSH1P38353 YKL063CYKL063C 504 nt0.49□□□□□ -2.33
SSH1P38353 YKL145W-AYKL145W-A 93 nt0.49□□□□□ -2.33
SSH1P38353 YLR202CYLR202C 327 nt0.49□□□□□ -2.33
SSH1P38353 Q0017Q0017 162 nt0.49□□□□□ -2.33
SSH1P38353 NPR2YEL062W 1848 nt0.49□□□□□ -2.33
SSH1P38353 YMR160WYMR160W 2451 nt0.48□□□□□ -2.33
SSH1P38353 YFR012W-AYFR012W-A 87 nt0.48□□□□□ -2.33
SSH1P38353 BSC3YLR465C 309 nt0.48□□□□□ -2.33
SSH1P38353 YLR334CYLR334C 381 nt0.47□□□□□ -2.33
SSH1P38353 CSN9YDR179C 489 nt0.46□□□□□ -2.34
SSH1P38353 YOL014WYOL014W 375 nt0.46□□□□□ -2.34
SSH1P38353 FYV10YIL097W 1551 nt0.45□□□□□ -2.34
SSH1P38353 PCC1YKR095W-A 267 nt0.45□□□□□ -2.34
SSH1P38353 VPS20YMR077C 666 nt0.45□□□□□ -2.34
SSH1P38353 YOR053WYOR053W 342 nt0.45□□□□□ -2.34
SSH1P38353 YPL068CYPL068C 882 nt0.45□□□□□ -2.34
SSH1P38353 YJL120WYJL120W 324 nt0.44□□□□□ -2.34
SSH1P38353 YJR157WYJR157W 363 nt0.44□□□□□ -2.34
SSH1P38353 AGA2YGL032C 264 nt0.43□□□□□ -2.34
SSH1P38353 YHR138CYHR138C 345 nt0.43□□□□□ -2.34
SSH1P38353 YNL211CYNL211C 261 nt0.43□□□□□ -2.34
SSH1P38353 YBR285WYBR285W 435 nt0.42□□□□□ -2.34
SSH1P38353 HAL9YOL089C 3093 nt0.42□□□□□ -2.34
SSH1P38353 PRP5YBR237W 2550 nt0.41□□□□□ -2.34
SSH1P38353 TAR1YLR154W-C 375 nt0.41□□□□□ -2.34
SSH1P38353 YOR218CYOR218C 420 nt0.41□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 40.4 ms