Protein–RNA interactions for Protein: P35207

SKI2, Antiviral helicase SKI2, yeastyeast

Known RBP RIP-Chip data

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI2P35207 tT(AGU)HtT(AGU)H 73 nt0.85□□□□□ -2.27
SKI2P35207 tT(AGU)I1tT(AGU)I1 73 nt0.85□□□□□ -2.27
SKI2P35207 tT(AGU)I2tT(AGU)I2 73 nt0.85□□□□□ -2.27
SKI2P35207 tT(AGU)JtT(AGU)J 73 nt0.85□□□□□ -2.27
SKI2P35207 tT(AGU)N1tT(AGU)N1 73 nt0.85□□□□□ -2.27
SKI2P35207 tT(AGU)N2tT(AGU)N2 73 nt0.85□□□□□ -2.27
SKI2P35207 tT(AGU)O1tT(AGU)O1 73 nt0.85□□□□□ -2.27
SKI2P35207 tT(AGU)O2tT(AGU)O2 73 nt0.85□□□□□ -2.27
SKI2P35207 SLI15YBR156C 2097 nt0.85□□□□□ -2.27
SKI2P35207 SLD3YGL113W 2007 nt0.84□□□□□ -2.27
SKI2P35207 YJL020W-AYJL020W-A 258 nt0.84□□□□□ -2.27
SKI2P35207 YOR108C-AYOR108C-A 210 nt0.84□□□□□ -2.27
SKI2P35207 STO1YMR125W 2586 nt0.84□□□□□ -2.28
SKI2P35207 LCD1YDR499W 2244 nt0.84□□□□□ -2.28
SKI2P35207 AIM9YER080W 1884 nt0.84□□□□□ -2.28
SKI2P35207 PKH2YOL100W 3246 nt0.83□□□□□ -2.28
SKI2P35207 DIE2YGR227W 1578 nt0.83□□□□□ -2.28
SKI2P35207 YDL011CYDL011C 324 nt0.83□□□□□ -2.28
SKI2P35207 snR72snR72 98 nt0.83□□□□□ -2.28
SKI2P35207 YLR434CYLR434C 384 nt0.83□□□□□ -2.28
SKI2P35207 YOR199WYOR199W 330 nt0.83□□□□□ -2.28
SKI2P35207 YPL205CYPL205C 345 nt0.83□□□□□ -2.28
SKI2P35207 YMR160WYMR160W 2451 nt0.83□□□□□ -2.28
SKI2P35207 SEC1YDR164C 2175 nt0.83□□□□□ -2.28
SKI2P35207 PCF11YDR228C 1881 nt0.82□□□□□ -2.28
SKI2P35207 NPC2YDL046W 522 nt0.82□□□□□ -2.28
SKI2P35207 YLR406C-AYLR406C-A 150 nt0.82□□□□□ -2.28
SKI2P35207 RRT1YBL048W 312 nt0.82□□□□□ -2.28
SKI2P35207 RPS24BYIL069C 408 nt0.81□□□□□ -2.28
SKI2P35207 YKL083WYKL083W 615 nt0.81□□□□□ -2.28
SKI2P35207 YBL008W-AYBL008W-A 240 nt0.81□□□□□ -2.28
SKI2P35207 MRPL50YNR022C 420 nt0.81□□□□□ -2.28
SKI2P35207 PRM3YPL192C 402 nt0.81□□□□□ -2.28
SKI2P35207 ZIP2YGL249W 2115 nt0.8□□□□□ -2.28
SKI2P35207 YAR047CYAR047C 321 nt0.8□□□□□ -2.28
SKI2P35207 SWF1YDR126W 1011 nt0.79□□□□□ -2.28
SKI2P35207 YER079WYER079W 633 nt0.79□□□□□ -2.28
SKI2P35207 YJL007CYJL007C 315 nt0.79□□□□□ -2.28
SKI2P35207 YMR290W-AYMR290W-A 348 nt0.79□□□□□ -2.28
SKI2P35207 RPB10YOR210W 213 nt0.79□□□□□ -2.28
SKI2P35207 GEA2YEL022W 4380 nt0.79□□□□□ -2.28
SKI2P35207 YKL202WYKL202W 582 nt0.78□□□□□ -2.28
SKI2P35207 snR51snR51 107 nt0.78□□□□□ -2.28
SKI2P35207 WAR1YML076C 2835 nt0.78□□□□□ -2.29
SKI2P35207 RKR1YMR247C 4689 nt0.77□□□□□ -2.29
SKI2P35207 GPG1YGL121C 381 nt0.76□□□□□ -2.29
SKI2P35207 YGR042WYGR042W 816 nt0.76□□□□□ -2.29
SKI2P35207 YOR293C-AYOR293C-A 150 nt0.76□□□□□ -2.29
SKI2P35207 YML002WYML002W 2214 nt0.75□□□□□ -2.29
SKI2P35207 YER137W-AYER137W-A 306 nt0.75□□□□□ -2.29
SKI2P35207 ALG13YGL047W 609 nt0.75□□□□□ -2.29
SKI2P35207 YMR272W-AYMR272W-A 114 nt0.75□□□□□ -2.29
SKI2P35207 IES4YOR189W 351 nt0.75□□□□□ -2.29
SKI2P35207 LEE1YPL054W 906 nt0.75□□□□□ -2.29
SKI2P35207 YBR285WYBR285W 435 nt0.74□□□□□ -2.29
SKI2P35207 YDL196WYDL196W 330 nt0.73□□□□□ -2.29
SKI2P35207 RPS20YHL015W 366 nt0.73□□□□□ -2.29
SKI2P35207 YPL229WYPL229W 621 nt0.73□□□□□ -2.29
SKI2P35207 PAN2YGL094C 3348 nt0.72□□□□□ -2.29
SKI2P35207 DBP6YNR038W 1890 nt0.72□□□□□ -2.29
SKI2P35207 CSN9YDR179C 489 nt0.72□□□□□ -2.29
SKI2P35207 AGA2YGL032C 264 nt0.72□□□□□ -2.29
SKI2P35207 YLR222C-AYLR222C-A 231 nt0.72□□□□□ -2.29
SKI2P35207 YLR264C-AYLR264C-A 117 nt0.72□□□□□ -2.29
SKI2P35207 YPL185WYPL185W 396 nt0.72□□□□□ -2.29
SKI2P35207 ISD11YER048W-A 285 nt0.71□□□□□ -2.3
SKI2P35207 YHR138CYHR138C 345 nt0.71□□□□□ -2.3
SKI2P35207 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
SKI2P35207 HAL9YOL089C 3093 nt0.7□□□□□ -2.3
SKI2P35207 YER078W-AYER078W-A 165 nt0.7□□□□□ -2.3
SKI2P35207 VAR1Q0140 1197 nt0.7□□□□□ -2.3
SKI2P35207 YMR031W-AYMR031W-A 327 nt0.7□□□□□ -2.3
SKI2P35207 YLL007CYLL007C 1998 nt0.7□□□□□ -2.3
SKI2P35207 YGR174W-AYGR174W-A 87 nt0.69□□□□□ -2.3
SKI2P35207 tW(UCA)QtW(UCA)Q 74 nt0.69□□□□□ -2.3
SKI2P35207 YOL160WYOL160W 342 nt0.69□□□□□ -2.3
SKI2P35207 YOR282WYOR282W 321 nt0.69□□□□□ -2.3
SKI2P35207 YIR044CYIR044C 186 nt0.68□□□□□ -2.3
SKI2P35207 YJR011CYJR011C 786 nt0.68□□□□□ -2.3
SKI2P35207 YPL261CYPL261C 309 nt0.68□□□□□ -2.3
SKI2P35207 INP2YMR163C 2118 nt0.67□□□□□ -2.3
SKI2P35207 CUL3YGR003W 2235 nt0.67□□□□□ -2.3
SKI2P35207 YHR063W-AYHR063W-A 336 nt0.67□□□□□ -2.3
SKI2P35207 YNL324WYNL324W 396 nt0.67□□□□□ -2.3
SKI2P35207 RAD34YDR314C 2079 nt0.67□□□□□ -2.3
SKI2P35207 AI1Q0050 2505 nt0.67□□□□□ -2.3
SKI2P35207 ATG31YDR022C 591 nt0.66□□□□□ -2.3
SKI2P35207 YDR426CYDR426C 378 nt0.66□□□□□ -2.3
SKI2P35207 MAM33YIL070C 801 nt0.66□□□□□ -2.3
SKI2P35207 BSC3YLR465C 309 nt0.66□□□□□ -2.3
SKI2P35207 YNL058CYNL058C 951 nt0.66□□□□□ -2.3
SKI2P35207 YBR064WYBR064W 429 nt0.66□□□□□ -2.3
SKI2P35207 YBR206WYBR206W 324 nt0.66□□□□□ -2.3
SKI2P35207 YDR344CYDR344C 444 nt0.65□□□□□ -2.31
SKI2P35207 YKL063CYKL063C 504 nt0.65□□□□□ -2.31
SKI2P35207 YOR053WYOR053W 342 nt0.65□□□□□ -2.31
SKI2P35207 YPR002C-AYPR002C-A 198 nt0.65□□□□□ -2.31
SKI2P35207 ECM12YHR021W-A 456 nt0.64□□□□□ -2.31
SKI2P35207 LTE1YAL024C 4308 nt0.63□□□□□ -2.31
SKI2P35207 YML007C-AYML007C-A 111 nt0.63□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 52.1 ms