Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF1P18846 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
ATF1P18846 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ATF1P18846 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATF1P18846 TMEM179-206ENST00000616017 1645 ntBASIC17.59■□□□□ 0.41
ATF1P18846 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF1P18846 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.59■□□□□ 0.41
ATF1P18846 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.59■□□□□ 0.41
ATF1P18846 KRT18P20-201ENST00000548986 1279 ntBASIC17.59■□□□□ 0.41
ATF1P18846 CCDC92B-201ENST00000575506 885 ntBASIC17.59■□□□□ 0.41
ATF1P18846 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.59■□□□□ 0.41
ATF1P18846 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
ATF1P18846 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ATF1P18846 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF1P18846 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATF1P18846 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ATF1P18846 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF1P18846 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.58■□□□□ 0.41
ATF1P18846 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.58■□□□□ 0.4
ATF1P18846 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATF1P18846 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.58■□□□□ 0.4
ATF1P18846 TERF1P2-201ENST00000583350 1212 ntBASIC17.58■□□□□ 0.4
ATF1P18846 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.58■□□□□ 0.4
ATF1P18846 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.58■□□□□ 0.4
ATF1P18846 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.58■□□□□ 0.4
ATF1P18846 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.58■□□□□ 0.4
ATF1P18846 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.58■□□□□ 0.4
ATF1P18846 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.58■□□□□ 0.4
ATF1P18846 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF1P18846 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATF1P18846 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF1P18846 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.57■□□□□ 0.4
ATF1P18846 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.57■□□□□ 0.4
ATF1P18846 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.57■□□□□ 0.4
ATF1P18846 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.57■□□□□ 0.4
ATF1P18846 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.57■□□□□ 0.4
ATF1P18846 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATF1P18846 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF1P18846 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ATF1P18846 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.57■□□□□ 0.4
ATF1P18846 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF1P18846 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ATF1P18846 YBX1P1-201ENST00000445822 960 ntBASIC17.57■□□□□ 0.4
ATF1P18846 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.57■□□□□ 0.4
ATF1P18846 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.57■□□□□ 0.4
ATF1P18846 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.57■□□□□ 0.4
ATF1P18846 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATF1P18846 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF1P18846 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATF1P18846 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF1P18846 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ATF1P18846 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ATF1P18846 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
ATF1P18846 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATF1P18846 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.56■□□□□ 0.4
ATF1P18846 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.56■□□□□ 0.4
ATF1P18846 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ATF1P18846 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.56■□□□□ 0.4
ATF1P18846 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ATF1P18846 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 TREX1-205ENST00000625293 1783 ntBASIC17.56■□□□□ 0.4
ATF1P18846 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF1P18846 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.55■□□□□ 0.4
ATF1P18846 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.55■□□□□ 0.4
ATF1P18846 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.55■□□□□ 0.4
ATF1P18846 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.55■□□□□ 0.4
ATF1P18846 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATF1P18846 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms