Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH1P12830 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH1P12830 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH1P12830 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH1P12830 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH1P12830 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CDH1P12830 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH1P12830 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH1P12830 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH1P12830 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH1P12830 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH1P12830 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.55■□□□□ 0.72
CDH1P12830 GPX1P1-201ENST00000388829 606 ntBASIC19.55■□□□□ 0.72
CDH1P12830 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH1P12830 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH1P12830 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH1P12830 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH1P12830 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH1P12830 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH1P12830 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDH1P12830 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH1P12830 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.55■□□□□ 0.72
CDH1P12830 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH1P12830 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH1P12830 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDH1P12830 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH1P12830 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 BX276092.2-201ENST00000417668 665 ntBASIC19.54■□□□□ 0.72
CDH1P12830 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.54■□□□□ 0.72
CDH1P12830 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH1P12830 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.54■□□□□ 0.72
CDH1P12830 AL589743.5-201ENST00000616611 1050 ntBASIC19.54■□□□□ 0.72
CDH1P12830 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH1P12830 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CDH1P12830 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH1P12830 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH1P12830 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH1P12830 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH1P12830 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH1P12830 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH1P12830 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH1P12830 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH1P12830 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CDH1P12830 GUSBP6-202ENST00000438529 1198 ntBASIC19.53■□□□□ 0.72
CDH1P12830 TSPY6P-201ENST00000448518 926 ntBASIC19.53■□□□□ 0.72
CDH1P12830 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH1P12830 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH1P12830 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CDH1P12830 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH1P12830 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH1P12830 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH1P12830 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH1P12830 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH1P12830 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH1P12830 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.52■□□□□ 0.72
CDH1P12830 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH1P12830 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH1P12830 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDH1P12830 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH1P12830 SLC29A4P1-201ENST00000398760 971 ntBASIC19.52■□□□□ 0.72
CDH1P12830 LSM12P1-201ENST00000411836 588 ntBASIC19.52■□□□□ 0.72
CDH1P12830 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH1P12830 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH1P12830 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH1P12830 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH1P12830 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms