Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
COL11A1P12107 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23■■□□□ 1.27
COL11A1P12107 AC133561.5-201ENST00000635547 218 ntBASIC23■■□□□ 1.27
COL11A1P12107 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A1P12107 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A1P12107 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23■■□□□ 1.27
COL11A1P12107 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
COL11A1P12107 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
COL11A1P12107 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.99■■□□□ 1.27
COL11A1P12107 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A1P12107 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
COL11A1P12107 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A1P12107 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.99■■□□□ 1.27
COL11A1P12107 AC026471.5-201ENST00000615068 467 ntBASIC22.99■■□□□ 1.27
COL11A1P12107 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
COL11A1P12107 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL11A1P12107 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
COL11A1P12107 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 RCN1P1-201ENST00000400413 996 ntBASIC22.98■■□□□ 1.27
COL11A1P12107 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.98■■□□□ 1.27
COL11A1P12107 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 KRT8P20-201ENST00000423953 1409 ntBASIC22.98■■□□□ 1.27
COL11A1P12107 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
COL11A1P12107 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.98■■□□□ 1.27
COL11A1P12107 AC026310.3-201ENST00000625186 2373 ntBASIC22.98■■□□□ 1.27
COL11A1P12107 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
COL11A1P12107 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
COL11A1P12107 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
COL11A1P12107 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
COL11A1P12107 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.98■■□□□ 1.27
COL11A1P12107 HTR7P1-201ENST00000538670 1336 ntBASIC22.98■■□□□ 1.27
COL11A1P12107 NIFKP9-201ENST00000419265 221 ntBASIC22.98■■□□□ 1.27
COL11A1P12107 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.98■■□□□ 1.27
COL11A1P12107 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.98■■□□□ 1.27
COL11A1P12107 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A1P12107 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL11A1P12107 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A1P12107 KRT16P1-201ENST00000399124 1418 ntBASIC22.97■■□□□ 1.27
COL11A1P12107 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A1P12107 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
COL11A1P12107 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
COL11A1P12107 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.97■■□□□ 1.27
COL11A1P12107 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.97■■□□□ 1.27
COL11A1P12107 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL11A1P12107 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A1P12107 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A1P12107 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.97■■□□□ 1.27
COL11A1P12107 FP700111.2-201ENST00000619190 1892 ntBASIC22.96■■□□□ 1.27
COL11A1P12107 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
COL11A1P12107 FAM197Y1-201ENST00000421178 764 ntBASIC22.96■■□□□ 1.27
COL11A1P12107 AL390955.1-201ENST00000428694 934 ntBASIC22.96■■□□□ 1.27
COL11A1P12107 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.96■■□□□ 1.27
COL11A1P12107 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A1P12107 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
COL11A1P12107 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A1P12107 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
COL11A1P12107 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
COL11A1P12107 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A1P12107 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A1P12107 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
COL11A1P12107 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
COL11A1P12107 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.96■■□□□ 1.27
COL11A1P12107 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.96■■□□□ 1.27
COL11A1P12107 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.96■■□□□ 1.27
COL11A1P12107 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
COL11A1P12107 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
COL11A1P12107 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.96■■□□□ 1.27
COL11A1P12107 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.96■■□□□ 1.27
COL11A1P12107 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
COL11A1P12107 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
COL11A1P12107 LINC00565-201ENST00000562710 2331 ntBASIC22.95■■□□□ 1.26
COL11A1P12107 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A1P12107 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A1P12107 YBX1P10-201ENST00000444752 975 ntBASIC22.95■■□□□ 1.26
COL11A1P12107 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.95■■□□□ 1.26
COL11A1P12107 C1QL1P1-201ENST00000568105 661 ntBASIC22.95■■□□□ 1.26
COL11A1P12107 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.95■■□□□ 1.26
COL11A1P12107 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.95■■□□□ 1.26
COL11A1P12107 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.95■■□□□ 1.26
COL11A1P12107 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.95■■□□□ 1.26
COL11A1P12107 MIR6786-201ENST00000616843 113 ntBASIC22.95■■□□□ 1.26
COL11A1P12107 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.95■■□□□ 1.26
COL11A1P12107 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A1P12107 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A1P12107 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A1P12107 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.95■■□□□ 1.26
COL11A1P12107 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A1P12107 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A1P12107 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A1P12107 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
COL11A1P12107 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.94■■□□□ 1.26
COL11A1P12107 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.94■■□□□ 1.26
COL11A1P12107 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A1P12107 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms