Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CNOT4O95628 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CNOT4O95628 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.81■□□□□ 0.44
CNOT4O95628 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT4O95628 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNOT4O95628 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT4O95628 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNOT4O95628 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT4O95628 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.8■□□□□ 0.44
CNOT4O95628 AL158047.1-201ENST00000445918 881 ntBASIC17.8■□□□□ 0.44
CNOT4O95628 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
CNOT4O95628 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT4O95628 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.8■□□□□ 0.44
CNOT4O95628 AC026366.1-201ENST00000488803 879 ntBASIC17.8■□□□□ 0.44
CNOT4O95628 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.8■□□□□ 0.44
CNOT4O95628 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CNOT4O95628 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT4O95628 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CNOT4O95628 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.8■□□□□ 0.44
CNOT4O95628 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT4O95628 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.79■□□□□ 0.44
CNOT4O95628 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.79■□□□□ 0.44
CNOT4O95628 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT4O95628 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 AL390719.1-204ENST00000412397 1219 ntBASIC17.79■□□□□ 0.44
CNOT4O95628 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT4O95628 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 AP003097.1-201ENST00000530657 1135 ntBASIC17.79■□□□□ 0.44
CNOT4O95628 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT4O95628 AC142381.4-202ENST00000563973 229 ntBASIC17.79■□□□□ 0.44
CNOT4O95628 AC005829.2-201ENST00000571422 1056 ntBASIC17.79■□□□□ 0.44
CNOT4O95628 AC006058.3-201ENST00000606217 1069 ntBASIC17.79■□□□□ 0.44
CNOT4O95628 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT4O95628 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT4O95628 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 AC007225.1-201ENST00000566331 1836 ntBASIC17.78■□□□□ 0.44
CNOT4O95628 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT4O95628 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT4O95628 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CNOT4O95628 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.78■□□□□ 0.44
CNOT4O95628 UNC93B4-201ENST00000505679 747 ntBASIC17.78■□□□□ 0.44
CNOT4O95628 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT4O95628 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT4O95628 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.78■□□□□ 0.44
CNOT4O95628 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT4O95628 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT4O95628 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms