Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX4O95219 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX4O95219 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX4O95219 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNX4O95219 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNX4O95219 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNX4O95219 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX4O95219 BX276092.2-201ENST00000417668 665 ntBASIC18.79■□□□□ 0.6
SNX4O95219 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.79■□□□□ 0.6
SNX4O95219 AC092118.2-201ENST00000613495 667 ntBASIC18.79■□□□□ 0.6
SNX4O95219 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
SNX4O95219 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SNX4O95219 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX4O95219 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNX4O95219 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX4O95219 AL049796.1-201ENST00000565336 1766 ntBASIC18.78■□□□□ 0.6
SNX4O95219 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX4O95219 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SNX4O95219 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX4O95219 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 AC069152.1-201ENST00000438030 544 ntBASIC18.78■□□□□ 0.6
SNX4O95219 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.78■□□□□ 0.6
SNX4O95219 AL138781.1-201ENST00000566567 1274 ntBASIC18.78■□□□□ 0.6
SNX4O95219 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX4O95219 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX4O95219 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX4O95219 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX4O95219 AC011484.1-201ENST00000377652 1995 ntBASIC18.77■□□□□ 0.6
SNX4O95219 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX4O95219 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX4O95219 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX4O95219 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SNX4O95219 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX4O95219 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.77■□□□□ 0.6
SNX4O95219 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNX4O95219 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNX4O95219 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX4O95219 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX4O95219 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX4O95219 CYP2T3P-201ENST00000601990 817 ntBASIC18.77■□□□□ 0.6
SNX4O95219 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX4O95219 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX4O95219 BX323043.1-201ENST00000641006 1765 ntBASIC18.77■□□□□ 0.6
SNX4O95219 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SNX4O95219 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SNX4O95219 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNX4O95219 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX4O95219 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SNX4O95219 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX4O95219 PCDHAC2-203ENST00000615316 3011 ntBASIC18.76■□□□□ 0.59
SNX4O95219 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX4O95219 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX4O95219 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX4O95219 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX4O95219 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX4O95219 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX4O95219 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX4O95219 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SNX4O95219 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SNX4O95219 AP005212.1-201ENST00000581547 1997 ntBASIC18.76■□□□□ 0.59
SNX4O95219 LSM12P1-201ENST00000411836 588 ntBASIC18.76■□□□□ 0.59
SNX4O95219 PGM5P4-201ENST00000421970 445 ntBASIC18.76■□□□□ 0.59
SNX4O95219 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.76■□□□□ 0.59
SNX4O95219 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
SNX4O95219 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.76■□□□□ 0.59
SNX4O95219 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.76■□□□□ 0.59
SNX4O95219 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX4O95219 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX4O95219 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX4O95219 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX4O95219 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms