Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF254O75437 AL020996.1-203ENST00000536896 2307 ntBASIC17.76■□□□□ 0.43
ZNF254O75437 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ZNF254O75437 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ZNF254O75437 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF254O75437 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF254O75437 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF254O75437 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ZNF254O75437 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF254O75437 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF254O75437 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF254O75437 DPP3P2-201ENST00000416030 1696 ntBASIC17.75■□□□□ 0.43
ZNF254O75437 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 LETM1P2-201ENST00000597330 2178 ntBASIC17.75■□□□□ 0.43
ZNF254O75437 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF254O75437 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF254O75437 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ZNF254O75437 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
ZNF254O75437 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF254O75437 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF254O75437 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF254O75437 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ZNF254O75437 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
ZNF254O75437 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ZNF254O75437 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF254O75437 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ZNF254O75437 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ZNF254O75437 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF254O75437 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF254O75437 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF254O75437 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF254O75437 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF254O75437 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF254O75437 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF254O75437 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF254O75437 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF254O75437 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF254O75437 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF254O75437 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ZNF254O75437 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF254O75437 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.73■□□□□ 0.43
ZNF254O75437 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF254O75437 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.73■□□□□ 0.43
ZNF254O75437 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.73■□□□□ 0.43
ZNF254O75437 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF254O75437 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF254O75437 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF254O75437 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF254O75437 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF254O75437 AC125437.2-201ENST00000625180 2167 ntBASIC17.73■□□□□ 0.43
ZNF254O75437 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF254O75437 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF254O75437 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ZNF254O75437 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF254O75437 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF254O75437 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF254O75437 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.72■□□□□ 0.43
ZNF254O75437 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF254O75437 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF254O75437 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.72■□□□□ 0.43
ZNF254O75437 MYCNOS-205ENST00000641950 531 ntBASIC17.72■□□□□ 0.43
ZNF254O75437 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF254O75437 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF254O75437 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms