Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CFAP99D6REC4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CFAP99D6REC4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CFAP99D6REC4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 DUSP5P2-201ENST00000426873 1033 ntBASIC19.99■□□□□ 0.79
CFAP99D6REC4 AC073210.2-201ENST00000430369 194 ntBASIC19.99■□□□□ 0.79
CFAP99D6REC4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 AP005212.1-201ENST00000581547 1997 ntBASIC19.99■□□□□ 0.79
CFAP99D6REC4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CFAP99D6REC4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.99■□□□□ 0.79
CFAP99D6REC4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.99■□□□□ 0.79
CFAP99D6REC4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP99D6REC4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP99D6REC4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP99D6REC4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP99D6REC4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP99D6REC4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.98■□□□□ 0.79
CFAP99D6REC4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.98■□□□□ 0.79
CFAP99D6REC4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CFAP99D6REC4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.98■□□□□ 0.79
CFAP99D6REC4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP99D6REC4 AC097658.1-201ENST00000475555 843 ntBASIC19.98■□□□□ 0.79
CFAP99D6REC4 AC091874.3-201ENST00000512672 1195 ntBASIC19.98■□□□□ 0.79
CFAP99D6REC4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CFAP99D6REC4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP99D6REC4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CFAP99D6REC4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CFAP99D6REC4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.98■□□□□ 0.79
CFAP99D6REC4 AC073314.1-201ENST00000568729 2216 ntBASIC19.98■□□□□ 0.79
CFAP99D6REC4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.98■□□□□ 0.79
CFAP99D6REC4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 AC069152.1-201ENST00000438030 544 ntBASIC19.97■□□□□ 0.79
CFAP99D6REC4 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.97■□□□□ 0.79
CFAP99D6REC4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.97■□□□□ 0.79
CFAP99D6REC4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CFAP99D6REC4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP99D6REC4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP99D6REC4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP99D6REC4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP99D6REC4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP99D6REC4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP99D6REC4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.96■□□□□ 0.79
CFAP99D6REC4 DPP3P2-201ENST00000416030 1696 ntBASIC19.96■□□□□ 0.79
CFAP99D6REC4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP99D6REC4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP99D6REC4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP99D6REC4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP99D6REC4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.95■□□□□ 0.78
CFAP99D6REC4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CFAP99D6REC4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP99D6REC4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP99D6REC4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.95■□□□□ 0.78
CFAP99D6REC4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP99D6REC4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.95■□□□□ 0.78
CFAP99D6REC4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP99D6REC4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.95■□□□□ 0.78
CFAP99D6REC4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CFAP99D6REC4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP99D6REC4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms