Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF4LA6NMK7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 AC087623.3-201ENST00000607047 1098 ntBASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 AL356652.1-201ENST00000615962 565 ntBASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.5■□□□□ 0.55
CPSF4LA6NMK7 AC087633.2-202ENST00000565166 1439 ntBASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 PGM5P4-201ENST00000421970 445 ntBASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 AL691432.2-201ENST00000607222 2038 ntBASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.49■□□□□ 0.55
CPSF4LA6NMK7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 AC137761.2-201ENST00000561729 223 ntBASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 AC145350.3-201ENST00000569033 163 ntBASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF4LA6NMK7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 CYP21A1P-202ENST00000354927 1481 ntBASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CPSF4LA6NMK7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms