Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SBNO1A3KN83 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SBNO1A3KN83 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
SBNO1A3KN83 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC27.4■■□□□ 1.98
SBNO1A3KN83 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC27.4■■□□□ 1.98
SBNO1A3KN83 AC010203.1-204ENST00000548782 407 ntBASIC27.4■■□□□ 1.98
SBNO1A3KN83 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC27.4■■□□□ 1.98
SBNO1A3KN83 AC006011.2-201ENST00000621313 1158 ntBASIC27.4■■□□□ 1.98
SBNO1A3KN83 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SBNO1A3KN83 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SBNO1A3KN83 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC27.4■■□□□ 1.98
SBNO1A3KN83 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SBNO1A3KN83 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC27.4■■□□□ 1.98
SBNO1A3KN83 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SBNO1A3KN83 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC27.39■■□□□ 1.98
SBNO1A3KN83 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SBNO1A3KN83 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SBNO1A3KN83 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC27.39■■□□□ 1.98
SBNO1A3KN83 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
SBNO1A3KN83 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC27.39■■□□□ 1.98
SBNO1A3KN83 MIR2861-201ENST00000636310 90 ntBASIC27.39■■□□□ 1.98
SBNO1A3KN83 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SBNO1A3KN83 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC27.38■■□□□ 1.97
SBNO1A3KN83 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SBNO1A3KN83 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC27.38■■□□□ 1.97
SBNO1A3KN83 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
SBNO1A3KN83 AC027702.1-201ENST00000563810 1770 ntBASIC27.38■■□□□ 1.97
SBNO1A3KN83 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SBNO1A3KN83 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC27.38■■□□□ 1.97
SBNO1A3KN83 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SBNO1A3KN83 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SBNO1A3KN83 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SBNO1A3KN83 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC27.37■■□□□ 1.97
SBNO1A3KN83 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC27.37■■□□□ 1.97
SBNO1A3KN83 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC27.37■■□□□ 1.97
SBNO1A3KN83 WWOX-216ENST00000569818 525 ntBASIC27.37■■□□□ 1.97
SBNO1A3KN83 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SBNO1A3KN83 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SBNO1A3KN83 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
SBNO1A3KN83 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SBNO1A3KN83 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SBNO1A3KN83 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SBNO1A3KN83 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
SBNO1A3KN83 MESTP1-201ENST00000404287 994 ntBASIC27.36■■□□□ 1.97
SBNO1A3KN83 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SBNO1A3KN83 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SBNO1A3KN83 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SBNO1A3KN83 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
SBNO1A3KN83 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SBNO1A3KN83 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SBNO1A3KN83 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC27.36■■□□□ 1.97
SBNO1A3KN83 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC27.36■■□□□ 1.97
SBNO1A3KN83 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC27.36■■□□□ 1.97
SBNO1A3KN83 AL117328.2-201ENST00000624617 1940 ntBASIC27.36■■□□□ 1.97
SBNO1A3KN83 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SBNO1A3KN83 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SBNO1A3KN83 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SBNO1A3KN83 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SBNO1A3KN83 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SBNO1A3KN83 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SBNO1A3KN83 AC087388.1-201ENST00000571370 1112 ntBASIC27.35■■□□□ 1.97
SBNO1A3KN83 AC026271.3-201ENST00000571884 352 ntBASIC27.35■■□□□ 1.97
SBNO1A3KN83 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC27.35■■□□□ 1.97
SBNO1A3KN83 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
SBNO1A3KN83 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SBNO1A3KN83 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SBNO1A3KN83 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
SBNO1A3KN83 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SBNO1A3KN83 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SBNO1A3KN83 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
SBNO1A3KN83 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SBNO1A3KN83 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC27.34■■□□□ 1.97
SBNO1A3KN83 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC27.34■■□□□ 1.97
SBNO1A3KN83 AP005242.2-201ENST00000580065 1175 ntBASIC27.34■■□□□ 1.97
SBNO1A3KN83 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
SBNO1A3KN83 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SBNO1A3KN83 PTBP1P-201ENST00000554374 1601 ntBASIC27.33■■□□□ 1.97
SBNO1A3KN83 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SBNO1A3KN83 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC27.33■■□□□ 1.97
SBNO1A3KN83 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SBNO1A3KN83 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SBNO1A3KN83 MYB-221ENST00000527615 2381 ntTSL 5 BASIC27.33■■□□□ 1.97
SBNO1A3KN83 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SBNO1A3KN83 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SBNO1A3KN83 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SBNO1A3KN83 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC27.33■■□□□ 1.97
SBNO1A3KN83 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SBNO1A3KN83 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC27.33■■□□□ 1.97
SBNO1A3KN83 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC27.33■■□□□ 1.97
SBNO1A3KN83 CLN6-221ENST00000637494 765 ntTSL 5 BASIC27.33■■□□□ 1.97
SBNO1A3KN83 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms