Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 AL137060.1-201ENST00000618151 2648 ntBASIC15.1■□□□□ 0.01
TRAV25A0A0B4J276 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 KRT8P17-201ENST00000453110 1448 ntBASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 DPP3P2-201ENST00000416030 1696 ntBASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV25A0A0B4J276 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 AC026366.1-201ENST00000488803 879 ntBASIC15.08■□□□□ 0
TRAV25A0A0B4J276 UNC93B4-201ENST00000505679 747 ntBASIC15.08■□□□□ 0
TRAV25A0A0B4J276 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 KRT16P6-202ENST00000425692 1426 ntBASIC15.08■□□□□ 0
TRAV25A0A0B4J276 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV25A0A0B4J276 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 AC020907.5-201ENST00000624372 1936 ntBASIC15.07■□□□□ 0
TRAV25A0A0B4J276 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 PTBP1P-201ENST00000554374 1601 ntBASIC15.07■□□□□ 0
TRAV25A0A0B4J276 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 FAM201B-201ENST00000458407 597 ntBASIC15.07■□□□□ 0
TRAV25A0A0B4J276 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 AP003097.1-201ENST00000530657 1135 ntBASIC15.07■□□□□ 0
TRAV25A0A0B4J276 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV25A0A0B4J276 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 SLC25A24-204ENST00000569674 2357 ntBASIC15.06■□□□□ 0
TRAV25A0A0B4J276 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms