Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 SNORA30B-201ENST00000365319 129 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 SNORD15A-201ENST00000384214 148 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 NPM1P10-201ENST00000398310 865 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AL590143.1-201ENST00000405071 138 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC068138.1-201ENST00000412635 217 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 MTCYBP15-201ENST00000433123 1127 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 RPL35P8-201ENST00000433284 337 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AL031736.1-201ENST00000449688 618 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 RN7SL233P-201ENST00000469988 277 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AL137802.2-201ENST00000562878 1110 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC005518.2-201ENST00000603254 282 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 RPS28P1-201ENST00000604589 187 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AL109936.2-201ENST00000605350 650 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC087072.2-201ENST00000621060 682 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC020923.1-201ENST00000624021 917 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AP002371.2-201ENST00000624450 503 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC097655.1-201ENST00000635075 318 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 ST7-213ENST00000432298 1956 ntTSL 2 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC02035-201ENST00000610128 5476 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 AC016831.3-201ENST00000446451 1723 ntBASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDK5RAP1Q96SZ6 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC013268.3-201ENST00000262716 2324 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC093107.1-201ENST00000422772 609 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC009299.1-201ENST00000429684 717 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC104389.2-201ENST00000450768 887 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 PCMTD1P3-201ENST00000451824 472 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC084871.2-201ENST00000503355 464 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC095059.2-201ENST00000510601 933 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC097460.2-201ENST00000511857 741 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 COX4I1P1-201ENST00000554239 509 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC009268.1-201ENST00000561352 1203 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AL096855.2-201ENST00000605785 369 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC017076.1-201ENST00000607613 578 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AC073592.7-201ENST00000623659 507 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 AL035563.1-201ENST00000609087 1539 ntBASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP1Q96SZ6 GTF2IP1-202ENST00000614592 2047 ntBASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms