Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 AL022163.1-201ENST00000430261 1569 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 MAPK10-379ENST00000642013 1385 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC020904.2-202ENST00000614660 1401 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 PID1-201ENST00000354069 839 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 RNU1-47P-201ENST00000362966 163 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 SNORA7B-201ENST00000384360 139 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 USP9YP19-201ENST00000412165 485 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 SLC25A5P2-201ENST00000413713 897 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 RPL36P18-201ENST00000419316 318 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 HMGN2P24-201ENST00000433516 273 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 SDR42E1P3-201ENST00000438345 502 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 TXNP3-201ENST00000454560 301 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 RN7SL587P-201ENST00000459853 281 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC139272.1-201ENST00000505516 640 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 GAPDHP31-201ENST00000509325 1014 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 BTF3P1-201ENST00000522014 495 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC244034.2-201ENST00000562504 509 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AL606760.4-201ENST00000617613 718 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC245033.3-201ENST00000617986 224 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 AL357153.4-201ENST00000620487 1016 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC073488.5-201ENST00000631993 754 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 AC092821.3-202ENST00000641304 2767 ntBASIC7.05□□□□□ -1.28
SNX18Q96RF0 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNX18Q96RF0 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SNX18Q96RF0 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AC016251.2-201ENST00000623393 3089 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AL022334.1-201ENST00000417397 1726 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 CFI-207ENST00000618244 1345 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AL450124.1-201ENST00000376401 353 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 OLA1P1-201ENST00000396387 1189 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AL031282.1-204ENST00000418950 497 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms