Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC013439.1-201ENST00000449965 1239 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 RAB28P2-201ENST00000454299 641 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC068587.2-201ENST00000478386 781 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 GAPDHP38-201ENST00000503632 1002 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC034244.2-201ENST00000514668 858 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC090539.2-201ENST00000523425 671 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 MIR4262-201ENST00000578394 54 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC006116.5-201ENST00000591936 559 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC005776.1-201ENST00000603164 290 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 ABI1P1-201ENST00000603375 1120 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 RN7SL715P-201ENST00000606972 286 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 MIR6761-201ENST00000617899 72 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC016831.3-201ENST00000446451 1723 ntBASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC073324.1-201ENST00000425993 1435 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 RNA5SP463-201ENST00000363030 120 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 RNA5SP297-201ENST00000391029 113 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 RN7SKP89-201ENST00000410774 242 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 MED15P8-201ENST00000411601 545 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 CRIP1P3-201ENST00000416794 220 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC011753.4-201ENST00000417974 311 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL354794.2-201ENST00000424795 1248 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC009269.1-202ENST00000484381 469 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC134349.2-201ENST00000535136 910 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AP006296.1-201ENST00000537438 499 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC142086.3-201ENST00000563896 802 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 RN7SL311P-201ENST00000579858 306 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AF186192.2-204ENST00000581667 524 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL109918.2-201ENST00000605188 279 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms