Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7□□□□□ -1.29
NCK1P16333 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7□□□□□ -1.29
NCK1P16333 AC074029.3-201ENST00000618623 312 ntBASIC7□□□□□ -1.29
NCK1P16333 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC7□□□□□ -1.29
NCK1P16333 AC015871.3-201ENST00000618835 2261 ntBASIC7□□□□□ -1.29
NCK1P16333 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7□□□□□ -1.29
NCK1P16333 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7□□□□□ -1.29
NCK1P16333 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
NCK1P16333 ATP5A1P10-201ENST00000622403 1603 ntBASIC7□□□□□ -1.29
NCK1P16333 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NCK1P16333 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7□□□□□ -1.29
NCK1P16333 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7□□□□□ -1.29
NCK1P16333 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
NCK1P16333 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NCK1P16333 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7□□□□□ -1.29
NCK1P16333 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7□□□□□ -1.29
NCK1P16333 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7□□□□□ -1.29
NCK1P16333 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 MEST-203ENST00000378576 2180 ntTSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 OR7E11P-202ENST00000642027 1491 ntBASIC6.99□□□□□ -1.29
NCK1P16333 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 AC092725.2-201ENST00000567658 1389 ntBASIC6.99□□□□□ -1.29
NCK1P16333 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 FO393411.1-201ENST00000325612 420 ntBASIC6.99□□□□□ -1.29
NCK1P16333 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NCK1P16333 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NCK1P16333 RN7SKP72-201ENST00000362327 292 ntBASIC6.99□□□□□ -1.29
NCK1P16333 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 MIR1204-201ENST00000408388 67 ntBASIC6.99□□□□□ -1.29
NCK1P16333 RPSAP2-201ENST00000416785 888 ntBASIC6.99□□□□□ -1.29
NCK1P16333 AC011753.4-201ENST00000417974 311 ntBASIC6.99□□□□□ -1.29
NCK1P16333 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC6.99□□□□□ -1.29
NCK1P16333 AC008753.1-201ENST00000423096 284 ntBASIC6.99□□□□□ -1.29
NCK1P16333 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.99□□□□□ -1.29
NCK1P16333 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC6.99□□□□□ -1.29
NCK1P16333 AC114755.4-201ENST00000439114 443 ntBASIC6.99□□□□□ -1.29
NCK1P16333 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.99□□□□□ -1.29
NCK1P16333 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.99□□□□□ -1.29
NCK1P16333 RN7SL36P-201ENST00000469345 276 ntBASIC6.99□□□□□ -1.29
NCK1P16333 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC6.99□□□□□ -1.29
NCK1P16333 NPY6R-201ENST00000503807 1112 ntBASIC6.99□□□□□ -1.29
NCK1P16333 AC006499.1-201ENST00000511870 850 ntBASIC6.99□□□□□ -1.29
NCK1P16333 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.99□□□□□ -1.29
NCK1P16333 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC6.99□□□□□ -1.29
NCK1P16333 POLB-211ENST00000521492 786 ntTSL 2 BASIC6.99□□□□□ -1.29
NCK1P16333 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC6.99□□□□□ -1.29
NCK1P16333 CHCHD3P2-201ENST00000550751 639 ntBASIC6.99□□□□□ -1.29
NCK1P16333 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.99□□□□□ -1.29
NCK1P16333 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.99□□□□□ -1.29
NCK1P16333 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.99□□□□□ -1.29
NCK1P16333 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 AL021807.1-201ENST00000607175 565 ntBASIC6.99□□□□□ -1.29
NCK1P16333 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 AP005329.3-201ENST00000609924 686 ntBASIC6.99□□□□□ -1.29
NCK1P16333 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NCK1P16333 AC129908.1-201ENST00000624553 648 ntBASIC6.99□□□□□ -1.29
NCK1P16333 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NCK1P16333 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.99□□□□□ -1.29
NCK1P16333 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
NCK1P16333 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCK1P16333 ST7-213ENST00000432298 1956 ntTSL 2 BASIC6.99□□□□□ -1.29
NCK1P16333 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
NCK1P16333 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.98□□□□□ -1.29
NCK1P16333 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCK1P16333 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCK1P16333 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.98□□□□□ -1.29
NCK1P16333 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCK1P16333 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.98□□□□□ -1.29
NCK1P16333 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCK1P16333 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCK1P16333 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.98□□□□□ -1.29
NCK1P16333 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
NCK1P16333 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NCK1P16333 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.98□□□□□ -1.29
NCK1P16333 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.98□□□□□ -1.29
NCK1P16333 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
NCK1P16333 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NCK1P16333 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.98□□□□□ -1.29
NCK1P16333 OR9K2-201ENST00000305377 1122 ntBASIC6.98□□□□□ -1.29
NCK1P16333 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
NCK1P16333 TAC1-203ENST00000350485 975 ntTSL 5 BASIC6.98□□□□□ -1.29
NCK1P16333 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NCK1P16333 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms