Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AL161787.1-201ENST00000401543 174 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 RPL12P27-201ENST00000414870 496 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 NPM1P30-201ENST00000425092 828 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 NFYAP1-201ENST00000431953 972 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 RPL5P17-201ENST00000469685 877 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC105910.1-201ENST00000482585 483 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 RN7SL416P-201ENST00000494042 298 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC091839.1-201ENST00000513087 269 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 CARD8-214ENST00000520007 614 ntTSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC144548.1-201ENST00000549577 324 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC233290.2-201ENST00000552852 390 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC024270.1-201ENST00000559181 404 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC040162.2-201ENST00000573092 157 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 MRPL45P2-203ENST00000573318 473 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 RN7SL664P-201ENST00000584239 305 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 SNRPCP20-201ENST00000588011 210 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AL391001.1-201ENST00000602747 715 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC005034.2-201ENST00000604464 414 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC012467.1-201ENST00000607740 256 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 NF1P10-201ENST00000613227 742 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AP000866.6-201ENST00000638898 3579 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC022507.1-201ENST00000548349 1505 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 CASR-201ENST00000490131 4015 ntTSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 RFKP1-201ENST00000400940 428 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 CASKP1-201ENST00000412870 582 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 TRIM43CP-201ENST00000422468 1028 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 NEFLP1-201ENST00000436364 984 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 AL024493.1-201ENST00000449217 833 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 RN7SL65P-201ENST00000485221 315 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 SNRPD2P1-201ENST00000489253 354 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 CASC16-201ENST00000510238 955 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 RN7SKP98-201ENST00000517070 156 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 IGLVIV-59-201ENST00000520218 250 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 AP006437.1-202ENST00000530327 933 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNX18Q96RF0 EIF1AXP2-201ENST00000555940 413 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 RN7SL785P-201ENST00000578437 253 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 AC144521.1-201ENST00000607148 956 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 AC069499.2-201ENST00000610665 382 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC7.06□□□□□ -1.28
SNX18Q96RF0 AL353684.1-201ENST00000622677 1120 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 AP000356.4-201ENST00000639500 172 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 AL596275.2-208ENST00000641192 594 ntBASIC7.06□□□□□ -1.28
SNX18Q96RF0 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms