Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC020549.1-201ENST00000536916 1440 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 AC007114.2-201ENST00000576014 4281 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 AL022334.1-201ENST00000417397 1726 ntBASIC6.38□□□□□ -1.39
AP3S2P59780 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
AP3S2P59780 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.38□□□□□ -1.39
AP3S2P59780 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
AP3S2P59780 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AP3S2P59780 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
AP3S2P59780 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.37□□□□□ -1.39
AP3S2P59780 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
AP3S2P59780 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.37□□□□□ -1.39
AP3S2P59780 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 RNA5SP256-201ENST00000390978 113 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 AL138807.1-201ENST00000400354 459 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 AC064862.3-201ENST00000411435 571 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 SNRPGP11-201ENST00000411777 232 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 RBPMSLP-201ENST00000433427 502 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 AC083939.1-201ENST00000445475 126 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.37□□□□□ -1.39
AP3S2P59780 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 NUCKS1P1-201ENST00000452067 703 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 AL137247.1-201ENST00000461502 764 ntTSL 3 BASIC6.37□□□□□ -1.39
AP3S2P59780 RPS14P7-201ENST00000473701 448 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 RN7SL333P-201ENST00000476398 297 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 AC026826.1-201ENST00000493002 361 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
AP3S2P59780 AC106774.1-201ENST00000515105 321 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 RNA5SP116-201ENST00000516132 98 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 RASA4-217ENST00000538869 483 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC6.37□□□□□ -1.39
AP3S2P59780 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.37□□□□□ -1.39
AP3S2P59780 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC6.37□□□□□ -1.39
AP3S2P59780 AL121917.2-201ENST00000605044 390 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC6.37□□□□□ -1.39
AP3S2P59780 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.37□□□□□ -1.39
AP3S2P59780 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 MROH3P-201ENST00000435735 2676 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.37□□□□□ -1.39
AP3S2P59780 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.37□□□□□ -1.39
AP3S2P59780 MAPK10-344ENST00000641718 3746 ntBASIC6.37□□□□□ -1.39
AP3S2P59780 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.37□□□□□ -1.39
AP3S2P59780 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
AP3S2P59780 C9orf153-201ENST00000339137 1845 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
AP3S2P59780 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
AP3S2P59780 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC6.36□□□□□ -1.39
AP3S2P59780 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
AP3S2P59780 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AP3S2P59780 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AP3S2P59780 LINC01847-203ENST00000641163 1490 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
AP3S2P59780 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AP3S2P59780 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AP3S2P59780 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
AP3S2P59780 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
AP3S2P59780 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
AP3S2P59780 AL031864.1-201ENST00000392075 423 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
AP3S2P59780 SNORD3J-201ENST00000408473 190 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.36□□□□□ -1.39
AP3S2P59780 VN2R10P-201ENST00000411871 853 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.36□□□□□ -1.39
AP3S2P59780 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC6.36□□□□□ -1.39
AP3S2P59780 AL356124.1-201ENST00000430296 728 ntTSL 5 BASIC6.36□□□□□ -1.39
AP3S2P59780 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC6.36□□□□□ -1.39
AP3S2P59780 ACTP1-201ENST00000440793 383 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC6.36□□□□□ -1.39
AP3S2P59780 AL357037.1-201ENST00000454758 322 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 RN7SL740P-201ENST00000467060 344 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
AP3S2P59780 AC113352.1-201ENST00000513196 666 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 RPL10P9-201ENST00000522551 645 ntBASIC6.36□□□□□ -1.39
AP3S2P59780 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC6.36□□□□□ -1.39
AP3S2P59780 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms