Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SL635P-201ENST00000492123 296 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AC079768.1-201ENST00000503181 711 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AC100823.2-201ENST00000518337 699 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AP004833.3-201ENST00000531893 322 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AC006120.1-201ENST00000579375 546 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 Z93930.3-201ENST00000607919 749 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AL353898.2-201ENST00000623000 255 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 MAPK10-354ENST00000641823 2732 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AL080312.1-201ENST00000256654 824 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 OR9K2-201ENST00000305377 1122 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 KRT18P52-201ENST00000404956 846 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SKP39-201ENST00000410773 322 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 RPS18P13-201ENST00000461260 454 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SL549P-201ENST00000478997 282 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 RPL23AP68-201ENST00000480924 445 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 PDPN-205ENST00000487038 607 ntTSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SL869P-201ENST00000497032 300 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC008629.3-201ENST00000505786 586 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 NDFIP1P1-201ENST00000543144 525 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 SERPINA9-208ENST00000546329 1156 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 DCN-207ENST00000546370 586 ntTSL 3 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC133569.1-201ENST00000564327 373 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AP001120.4-201ENST00000590231 108 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AC106730.3-201ENST00000624568 641 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 HSPD1P10-201ENST00000404829 1676 ntBASIC8.05□□□□□ -1.12
CDK5RAP1Q96SZ6 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms