Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HLA-DOAP06340 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HLA-DOAP06340 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.99□□□□□ -0.97
HLA-DOAP06340 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
HLA-DOAP06340 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 MAPK10-333ENST00000641607 2481 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 ABCF2P1-201ENST00000465687 1867 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 RPL36P1-201ENST00000419720 225 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 FDPSP6-201ENST00000425091 512 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 RPL24P8-201ENST00000446071 474 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 AC007547.2-201ENST00000468802 360 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 RN7SL332P-201ENST00000482163 254 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 AC243830.2-201ENST00000618067 630 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 AC127459.1-201ENST00000563129 2768 ntBASIC8.98□□□□□ -0.97
HLA-DOAP06340 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HLA-DOAP06340 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC8.98□□□□□ -0.97
HLA-DOAP06340 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AL391380.1-201ENST00000439300 1432 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 AL031123.2-201ENST00000563225 3325 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 LINC00294-201ENST00000631190 3306 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 IL6-202ENST00000401630 765 ntTSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 RN7SKP207-201ENST00000411204 303 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC004986.1-201ENST00000414855 607 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 PRKAR1AP1-201ENST00000441422 1162 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC233724.10-201ENST00000510454 409 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 RN7SKP2-201ENST00000517003 319 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC087257.2-201ENST00000538759 928 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 ATP5J2P4-201ENST00000538774 267 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 UBE2CP4-201ENST00000561405 535 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC024614.1-201ENST00000577546 307 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 AL589765.5-201ENST00000596133 515 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 RN7SL680P-201ENST00000620379 299 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC106795.5-201ENST00000623288 454 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 FKBP1AP4-201ENST00000631775 336 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 AC073488.8-201ENST00000631952 757 ntBASIC8.97□□□□□ -0.97
HLA-DOAP06340 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HLA-DOAP06340 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
HLA-DOAP06340 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.96□□□□□ -0.97
HLA-DOAP06340 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
HLA-DOAP06340 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.96□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms