Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC022150.4-201ENST00000598322 2848 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 MIR106B-201ENST00000385301 82 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AC009299.1-201ENST00000429684 717 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AL929410.2-201ENST00000451170 189 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AC133965.1-201ENST00000452984 354 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AC004692.1-201ENST00000455430 424 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 OR7E83P-201ENST00000511021 970 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AC012557.3-201ENST00000626439 255 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 ABCF2P1-201ENST00000465687 1867 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 AC110926.1-201ENST00000412499 2825 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 RNU6-673P-201ENST00000365084 104 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 RNA5SP185-201ENST00000390963 114 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AC003071.2-201ENST00000423857 315 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AL357037.1-201ENST00000454758 322 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 RN7SL308P-201ENST00000464971 297 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 RN7SL335P-201ENST00000482790 304 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 IGLVIV-59-201ENST00000520218 250 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AC091304.5-201ENST00000568969 158 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 MIR3137-201ENST00000577367 75 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 OR7A1P-201ENST00000601206 970 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AC116165.3-201ENST00000614524 400 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AC119674.1-217ENST00000641942 1086 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AP000766.1-201ENST00000561746 4140 ntBASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NPIPA3F8WFD2 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms