Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC112907.3-201ENST00000577781 2400 ntBASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 PTBP1P-201ENST00000554374 1601 ntBASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4BQ9Y4P1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 AL138781.1-201ENST00000566567 1274 ntBASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 AC092118.2-201ENST00000613495 667 ntBASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.04■□□□□ 0.64
ATG4BQ9Y4P1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 PCDHAC2-203ENST00000615316 3011 ntBASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATG4BQ9Y4P1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 DUSP5P2-201ENST00000426873 1033 ntBASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 MIR4758-201ENST00000577688 71 ntBASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
ATG4BQ9Y4P1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATG4BQ9Y4P1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATG4BQ9Y4P1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATG4BQ9Y4P1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATG4BQ9Y4P1 AC098934.4-201ENST00000564127 592 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms