Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF2Q9HAW0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.25■□□□□ 0.67
BRF2Q9HAW0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 AC005181.1-201ENST00000604782 1256 ntBASIC19.24■□□□□ 0.67
BRF2Q9HAW0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 AL589743.5-201ENST00000616611 1050 ntBASIC19.24■□□□□ 0.67
BRF2Q9HAW0 AC092437.1-201ENST00000624794 1048 ntBASIC19.24■□□□□ 0.67
BRF2Q9HAW0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF2Q9HAW0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 AL691432.2-201ENST00000607222 2038 ntBASIC19.23■□□□□ 0.67
BRF2Q9HAW0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF2Q9HAW0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 TMEM179-206ENST00000616017 1645 ntBASIC19.22■□□□□ 0.67
BRF2Q9HAW0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.22■□□□□ 0.67
BRF2Q9HAW0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 AC004911.1-201ENST00000416316 871 ntBASIC19.22■□□□□ 0.67
BRF2Q9HAW0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 AC133552.2-202ENST00000575694 574 ntBASIC19.22■□□□□ 0.67
BRF2Q9HAW0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 AC080038.1-201ENST00000611274 1154 ntBASIC19.22■□□□□ 0.67
BRF2Q9HAW0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 KRT8P17-201ENST00000453110 1448 ntBASIC19.22■□□□□ 0.67
BRF2Q9HAW0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRF2Q9HAW0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRF2Q9HAW0 AL355472.2-201ENST00000422958 438 ntBASIC19.21■□□□□ 0.67
BRF2Q9HAW0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms