Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 AF201337.1-201ENST00000520239 748 ntBASIC25.37■■□□□ 1.65
CHMP4BQ9H444 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 TCF3P1-201ENST00000423021 1937 ntBASIC25.37■■□□□ 1.65
CHMP4BQ9H444 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CHMP4BQ9H444 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 AL355472.2-201ENST00000422958 438 ntBASIC25.36■■□□□ 1.65
CHMP4BQ9H444 AC093787.1-201ENST00000450396 207 ntBASIC25.36■■□□□ 1.65
CHMP4BQ9H444 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 KRT8P17-201ENST00000453110 1448 ntBASIC25.36■■□□□ 1.65
CHMP4BQ9H444 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHMP4BQ9H444 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 C2orf69P4-201ENST00000565394 541 ntBASIC25.35■■□□□ 1.65
CHMP4BQ9H444 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 KRT8P20-201ENST00000423953 1409 ntBASIC25.35■■□□□ 1.65
CHMP4BQ9H444 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
CHMP4BQ9H444 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 PTBP1P-201ENST00000554374 1601 ntBASIC25.34■■□□□ 1.65
CHMP4BQ9H444 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 HLA-G-202ENST00000376815 851 ntBASIC25.34■■□□□ 1.65
CHMP4BQ9H444 HLA-G-203ENST00000376818 1127 ntBASIC25.34■■□□□ 1.65
CHMP4BQ9H444 LSM12P1-201ENST00000411836 588 ntBASIC25.34■■□□□ 1.65
CHMP4BQ9H444 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 RAP2CP1-201ENST00000605103 478 ntBASIC25.34■■□□□ 1.65
CHMP4BQ9H444 AL031963.3-201ENST00000606441 850 ntBASIC25.34■■□□□ 1.65
CHMP4BQ9H444 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHMP4BQ9H444 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 MKRN4P-201ENST00000444706 1521 ntBASIC25.33■■□□□ 1.65
CHMP4BQ9H444 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 AC105036.2-201ENST00000569468 176 ntBASIC25.33■■□□□ 1.65
CHMP4BQ9H444 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHMP4BQ9H444 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.64
CHMP4BQ9H444 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CHMP4BQ9H444 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 KRT16P6-202ENST00000425692 1426 ntBASIC25.32■■□□□ 1.64
CHMP4BQ9H444 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 AC023632.3-201ENST00000521633 145 ntBASIC25.32■■□□□ 1.64
CHMP4BQ9H444 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.32■■□□□ 1.64
CHMP4BQ9H444 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms