Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
NUCKS1Q9H1E3 TMEM179-206ENST00000616017 1645 ntBASIC21.79■■□□□ 1.08
NUCKS1Q9H1E3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUCKS1Q9H1E3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUCKS1Q9H1E3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUCKS1Q9H1E3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUCKS1Q9H1E3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 AC073111.5-205ENST00000641717 521 ntBASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 BX119927.1-201ENST00000636596 1552 ntBASIC21.78■■□□□ 1.08
NUCKS1Q9H1E3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 CDCA4P2-201ENST00000441182 718 ntBASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NUCKS1Q9H1E3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NUCKS1Q9H1E3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
NUCKS1Q9H1E3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NUCKS1Q9H1E3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUCKS1Q9H1E3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 RAP2CP1-201ENST00000605103 478 ntBASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUCKS1Q9H1E3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 AC087633.2-202ENST00000565166 1439 ntBASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms