Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL21A1Q96P44 MIR663A-201ENST00000385250 93 ntBASIC18.98■□□□□ 0.63
COL21A1Q96P44 CYP2T1P-201ENST00000432607 1285 ntBASIC18.98■□□□□ 0.63
COL21A1Q96P44 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL21A1Q96P44 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 AC069236.1-201ENST00000604339 616 ntBASIC18.98■□□□□ 0.63
COL21A1Q96P44 FAM21FP-204ENST00000608637 956 ntBASIC18.98■□□□□ 0.63
COL21A1Q96P44 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL21A1Q96P44 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 AC008694.1-202ENST00000636953 945 ntBASIC18.98■□□□□ 0.63
COL21A1Q96P44 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL21A1Q96P44 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL21A1Q96P44 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL21A1Q96P44 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL21A1Q96P44 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.97■□□□□ 0.63
COL21A1Q96P44 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL21A1Q96P44 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.97■□□□□ 0.63
COL21A1Q96P44 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.97■□□□□ 0.63
COL21A1Q96P44 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 CROCCP5-201ENST00000436658 830 ntBASIC18.97■□□□□ 0.63
COL21A1Q96P44 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 AC006970.2-201ENST00000450065 779 ntBASIC18.97■□□□□ 0.63
COL21A1Q96P44 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL21A1Q96P44 AC090192.1-201ENST00000517740 490 ntBASIC18.97■□□□□ 0.63
COL21A1Q96P44 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 AC016405.3-201ENST00000607710 860 ntBASIC18.97■□□□□ 0.63
COL21A1Q96P44 AC099778.1-201ENST00000568593 1911 ntBASIC18.97■□□□□ 0.63
COL21A1Q96P44 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
COL21A1Q96P44 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
COL21A1Q96P44 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL21A1Q96P44 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
COL21A1Q96P44 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 RARRES2P4-201ENST00000514074 484 ntBASIC18.96■□□□□ 0.63
COL21A1Q96P44 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 MIR2861-201ENST00000636310 90 ntBASIC18.96■□□□□ 0.63
COL21A1Q96P44 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.96■□□□□ 0.63
COL21A1Q96P44 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL21A1Q96P44 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
COL21A1Q96P44 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
COL21A1Q96P44 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.95■□□□□ 0.62
COL21A1Q96P44 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
COL21A1Q96P44 OR10C1-204ENST00000622521 1039 ntBASIC18.95■□□□□ 0.62
COL21A1Q96P44 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.95■□□□□ 0.62
COL21A1Q96P44 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.95■□□□□ 0.62
COL21A1Q96P44 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL21A1Q96P44 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL21A1Q96P44 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL21A1Q96P44 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL21A1Q96P44 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL21A1Q96P44 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms