Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 AP003097.1-201ENST00000530657 1135 ntBASIC20.74■□□□□ 0.91
RPRD1AQ96P16 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPRD1AQ96P16 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 ABHD17AP1-201ENST00000358206 933 ntBASIC20.73■□□□□ 0.91
RPRD1AQ96P16 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 POU5F1P3-201ENST00000428824 1078 ntBASIC20.73■□□□□ 0.91
RPRD1AQ96P16 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 AC023632.3-201ENST00000521633 145 ntBASIC20.73■□□□□ 0.91
RPRD1AQ96P16 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 AC006557.6-201ENST00000623071 864 ntBASIC20.73■□□□□ 0.91
RPRD1AQ96P16 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPRD1AQ96P16 AC073314.1-201ENST00000568729 2216 ntBASIC20.73■□□□□ 0.91
RPRD1AQ96P16 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 AC026366.1-201ENST00000488803 879 ntBASIC20.72■□□□□ 0.91
RPRD1AQ96P16 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 UNC93B4-201ENST00000505679 747 ntBASIC20.72■□□□□ 0.91
RPRD1AQ96P16 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPRD1AQ96P16 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 PTBP1P-201ENST00000554374 1601 ntBASIC20.71■□□□□ 0.91
RPRD1AQ96P16 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.71■□□□□ 0.91
RPRD1AQ96P16 AC020907.5-201ENST00000624372 1936 ntBASIC20.7■□□□□ 0.91
RPRD1AQ96P16 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
RPRD1AQ96P16 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 SMG8-203ENST00000578922 2178 ntBASIC20.7■□□□□ 0.9
RPRD1AQ96P16 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 FEM1AP1-201ENST00000431297 1995 ntBASIC20.7■□□□□ 0.9
RPRD1AQ96P16 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPRD1AQ96P16 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.69■□□□□ 0.9
RPRD1AQ96P16 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms