Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ITCHQ96J02 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ITCHQ96J02 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ITCHQ96J02 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
ITCHQ96J02 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.13■□□□□ 0.65
ITCHQ96J02 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ITCHQ96J02 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ITCHQ96J02 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.13■□□□□ 0.65
ITCHQ96J02 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.13■□□□□ 0.65
ITCHQ96J02 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.13■□□□□ 0.65
ITCHQ96J02 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.13■□□□□ 0.65
ITCHQ96J02 TMEM179-206ENST00000616017 1645 ntBASIC19.13■□□□□ 0.65
ITCHQ96J02 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ITCHQ96J02 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.13■□□□□ 0.65
ITCHQ96J02 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.13■□□□□ 0.65
ITCHQ96J02 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.13■□□□□ 0.65
ITCHQ96J02 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.12■□□□□ 0.65
ITCHQ96J02 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.12■□□□□ 0.65
ITCHQ96J02 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.12■□□□□ 0.65
ITCHQ96J02 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.12■□□□□ 0.65
ITCHQ96J02 AC097381.1-201ENST00000429019 1296 ntBASIC19.12■□□□□ 0.65
ITCHQ96J02 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.12■□□□□ 0.65
ITCHQ96J02 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.12■□□□□ 0.65
ITCHQ96J02 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 AC125437.2-201ENST00000625180 2167 ntBASIC19.12■□□□□ 0.65
ITCHQ96J02 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITCHQ96J02 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.11■□□□□ 0.65
ITCHQ96J02 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.11■□□□□ 0.65
ITCHQ96J02 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 BX119927.1-201ENST00000636596 1552 ntBASIC19.11■□□□□ 0.65
ITCHQ96J02 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 PGM5P4-201ENST00000421970 445 ntBASIC19.11■□□□□ 0.65
ITCHQ96J02 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.11■□□□□ 0.65
ITCHQ96J02 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.11■□□□□ 0.65
ITCHQ96J02 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.11■□□□□ 0.65
ITCHQ96J02 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ITCHQ96J02 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ITCHQ96J02 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.11■□□□□ 0.65
ITCHQ96J02 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
ITCHQ96J02 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.11■□□□□ 0.65
ITCHQ96J02 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ITCHQ96J02 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ITCHQ96J02 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.11■□□□□ 0.65
ITCHQ96J02 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ITCHQ96J02 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.11■□□□□ 0.65
ITCHQ96J02 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITCHQ96J02 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.1■□□□□ 0.65
ITCHQ96J02 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ITCHQ96J02 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.1■□□□□ 0.65
ITCHQ96J02 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ITCHQ96J02 KRT19P1-201ENST00000405746 1186 ntBASIC19.1■□□□□ 0.65
ITCHQ96J02 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
ITCHQ96J02 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.1■□□□□ 0.65
ITCHQ96J02 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ITCHQ96J02 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 AL691432.2-201ENST00000607222 2038 ntBASIC19.1■□□□□ 0.65
ITCHQ96J02 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITCHQ96J02 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITCHQ96J02 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.09■□□□□ 0.65
ITCHQ96J02 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.09■□□□□ 0.65
ITCHQ96J02 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ITCHQ96J02 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITCHQ96J02 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms