Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PTP4A1Q93096 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A1Q93096 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTP4A1Q93096 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A1Q93096 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.04■□□□□ 0.48
PTP4A1Q93096 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
PTP4A1Q93096 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.04■□□□□ 0.48
PTP4A1Q93096 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.04■□□□□ 0.48
PTP4A1Q93096 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.04■□□□□ 0.48
PTP4A1Q93096 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTP4A1Q93096 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.04■□□□□ 0.48
PTP4A1Q93096 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTP4A1Q93096 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTP4A1Q93096 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 FAM21FP-204ENST00000608637 956 ntBASIC18.03■□□□□ 0.48
PTP4A1Q93096 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.03■□□□□ 0.48
PTP4A1Q93096 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTP4A1Q93096 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTP4A1Q93096 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTP4A1Q93096 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PTP4A1Q93096 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.02■□□□□ 0.48
PTP4A1Q93096 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTP4A1Q93096 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PTP4A1Q93096 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.02■□□□□ 0.48
PTP4A1Q93096 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTP4A1Q93096 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.02■□□□□ 0.48
PTP4A1Q93096 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.02■□□□□ 0.48
PTP4A1Q93096 KRT18P5-201ENST00000436075 1291 ntBASIC18.02■□□□□ 0.48
PTP4A1Q93096 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.02■□□□□ 0.48
PTP4A1Q93096 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PTP4A1Q93096 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTP4A1Q93096 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTP4A1Q93096 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.02■□□□□ 0.47
PTP4A1Q93096 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.02■□□□□ 0.47
PTP4A1Q93096 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.02■□□□□ 0.47
PTP4A1Q93096 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.02■□□□□ 0.47
PTP4A1Q93096 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms