Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCHCR1Q8TD31 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 AC004911.1-201ENST00000416316 871 ntBASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 AC087289.5-201ENST00000586076 3175 ntBASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.91■□□□□ 0.94
CCHCR1Q8TD31 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 AC011767.1-201ENST00000617410 1153 ntBASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.9■□□□□ 0.94
CCHCR1Q8TD31 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CCHCR1Q8TD31 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.89■□□□□ 0.94
CCHCR1Q8TD31 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCHCR1Q8TD31 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCHCR1Q8TD31 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 AC243732.1-201ENST00000612648 864 ntBASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCHCR1Q8TD31 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCHCR1Q8TD31 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms