Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 AC113410.3-201ENST00000623366 203 ntBASIC24.9■■□□□ 1.58
RTL9Q8NET4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTL9Q8NET4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.9■■□□□ 1.58
RTL9Q8NET4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.89■■□□□ 1.58
RTL9Q8NET4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
RTL9Q8NET4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RTL9Q8NET4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RTL9Q8NET4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTL9Q8NET4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTL9Q8NET4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTL9Q8NET4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.89■■□□□ 1.57
RTL9Q8NET4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
RTL9Q8NET4 AP001412.1-201ENST00000608405 714 ntBASIC24.89■■□□□ 1.57
RTL9Q8NET4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTL9Q8NET4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTL9Q8NET4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RTL9Q8NET4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.89■■□□□ 1.57
RTL9Q8NET4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTL9Q8NET4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RTL9Q8NET4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.88■■□□□ 1.57
RTL9Q8NET4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
RTL9Q8NET4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC24.88■■□□□ 1.57
RTL9Q8NET4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTL9Q8NET4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC24.88■■□□□ 1.57
RTL9Q8NET4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.88■■□□□ 1.57
RTL9Q8NET4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
RTL9Q8NET4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTL9Q8NET4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTL9Q8NET4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RTL9Q8NET4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTL9Q8NET4 KRT18P21-201ENST00000515767 1272 ntBASIC24.87■■□□□ 1.57
RTL9Q8NET4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC24.87■■□□□ 1.57
RTL9Q8NET4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTL9Q8NET4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTL9Q8NET4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTL9Q8NET4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTL9Q8NET4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTL9Q8NET4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTL9Q8NET4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTL9Q8NET4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTL9Q8NET4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTL9Q8NET4 HLA-G-202ENST00000376815 851 ntBASIC24.86■■□□□ 1.57
RTL9Q8NET4 HLA-G-203ENST00000376818 1127 ntBASIC24.86■■□□□ 1.57
RTL9Q8NET4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 KRT16P5-201ENST00000455284 522 ntBASIC24.86■■□□□ 1.57
RTL9Q8NET4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTL9Q8NET4 KRT8P20-201ENST00000423953 1409 ntBASIC24.86■■□□□ 1.57
RTL9Q8NET4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RTL9Q8NET4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTL9Q8NET4 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.85■■□□□ 1.57
RTL9Q8NET4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RTL9Q8NET4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RTL9Q8NET4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.85■■□□□ 1.57
RTL9Q8NET4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC24.85■■□□□ 1.57
RTL9Q8NET4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RTL9Q8NET4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTL9Q8NET4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTL9Q8NET4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.84■■□□□ 1.57
RTL9Q8NET4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
RTL9Q8NET4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTL9Q8NET4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC24.84■■□□□ 1.57
RTL9Q8NET4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RTL9Q8NET4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTL9Q8NET4 NBPF21P-201ENST00000425093 1451 ntBASIC24.84■■□□□ 1.57
RTL9Q8NET4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTL9Q8NET4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTL9Q8NET4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms