Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 MIR4497-201ENST00000583208 89 ntBASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC38A9Q8NBW4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC38A9Q8NBW4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
SLC38A9Q8NBW4 AC005229.4-201ENST00000610085 2198 ntBASIC19.02■□□□□ 0.63
SLC38A9Q8NBW4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 FP700111.2-201ENST00000619190 1892 ntBASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 AC110285.5-201ENST00000611501 352 ntBASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC38A9Q8NBW4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 SNORA78-201ENST00000459373 127 ntBASIC19■□□□□ 0.63
SLC38A9Q8NBW4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC38A9Q8NBW4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 RPS2P55-201ENST00000397318 883 ntBASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 AC107956.1-201ENST00000494359 873 ntBASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC38A9Q8NBW4 AC006128.1-201ENST00000624704 1661 ntBASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 AC233702.5-201ENST00000584107 538 ntBASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC38A9Q8NBW4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC38A9Q8NBW4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC38A9Q8NBW4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms