Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRPF38AQ8NAV1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
PRPF38AQ8NAV1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.27■■□□□ 1.32
PRPF38AQ8NAV1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PRPF38AQ8NAV1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PRPF38AQ8NAV1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 AF106564.1-201ENST00000607058 2553 ntBASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 AC007375.3-201ENST00000600936 2314 ntBASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 AL135905.2-201ENST00000584934 1404 ntBASIC23.25■■□□□ 1.31
PRPF38AQ8NAV1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 AL121603.2-201ENST00000557373 2117 ntBASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
PRPF38AQ8NAV1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 PTBP1P-201ENST00000554374 1601 ntBASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 AP001412.1-201ENST00000608405 714 ntBASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRPF38AQ8NAV1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 AC124283.5-201ENST00000624661 1809 ntBASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 HLA-G-202ENST00000376815 851 ntBASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 HLA-G-203ENST00000376818 1127 ntBASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 RARRES2P10-201ENST00000564312 460 ntBASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 AL049637.2-201ENST00000641778 930 ntBASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.22■■□□□ 1.31
PRPF38AQ8NAV1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms