Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 UNC93B4-201ENST00000505679 747 ntBASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 AC008403.3-201ENST00000598924 454 ntBASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 AL031963.3-201ENST00000606441 850 ntBASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf40Q8IXQ3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 ABHD17AP1-201ENST00000358206 933 ntBASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 ESRRAP1-201ENST00000400596 1257 ntBASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 AC026366.1-201ENST00000488803 879 ntBASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 AL512408.1-201ENST00000569378 2000 ntBASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf40Q8IXQ3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 LINC01006-201ENST00000333319 2292 ntBASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 KRT8P20-201ENST00000423953 1409 ntBASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 KRT8P17-201ENST00000453110 1448 ntBASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.58■□□□□ 0.57
C9orf40Q8IXQ3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.58■□□□□ 0.56
C9orf40Q8IXQ3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 HLA-G-202ENST00000376815 851 ntBASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 HLA-G-203ENST00000376818 1127 ntBASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.57■□□□□ 0.56
C9orf40Q8IXQ3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms