Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 AL390955.1-201ENST00000428694 934 ntBASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RP1L1Q8IWN7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 PGM5P4-201ENST00000421970 445 ntBASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 AC127496.7-201ENST00000625110 1798 ntBASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.22■□□□□ 0.51
RP1L1Q8IWN7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 LINC01568-207ENST00000641790 1380 ntBASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.21■□□□□ 0.51
RP1L1Q8IWN7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RP1L1Q8IWN7 AC005521.1-201ENST00000393351 872 ntBASIC18.21■□□□□ 0.5
RP1L1Q8IWN7 FAM197Y1-201ENST00000421178 764 ntBASIC18.21■□□□□ 0.5
RP1L1Q8IWN7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RP1L1Q8IWN7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.21■□□□□ 0.5
RP1L1Q8IWN7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.21■□□□□ 0.5
RP1L1Q8IWN7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RP1L1Q8IWN7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RP1L1Q8IWN7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 AC073508.3-201ENST00000619697 1419 ntBASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 RBM17P1-201ENST00000453646 1190 ntBASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 REXO1L10P-201ENST00000615707 1290 ntBASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RP1L1Q8IWN7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 AL356652.1-201ENST00000615962 565 ntBASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RP1L1Q8IWN7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms