Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRRTM1Q86UE6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LRRTM1Q86UE6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 AC091799.1-201ENST00000422823 811 ntBASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 AL031432.3-201ENST00000607698 485 ntBASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRRTM1Q86UE6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 AC004408.2-201ENST00000623613 2777 ntBASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 MIR6084-201ENST00000622012 110 ntBASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 AL358852.1-201ENST00000623174 1268 ntBASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRTM1Q86UE6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 IRS3P-201ENST00000223076 1006 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 DUX4L2-201ENST00000561772 1275 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 DUX4L6-201ENST00000626483 1275 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 DUX4L1-201ENST00000627662 1275 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 DUX4L8-201ENST00000629013 1275 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 DUX4L3-201ENST00000630187 1275 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 DUX4L7-201ENST00000630678 1275 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 DUX4L5-201ENST00000630834 1275 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRTM1Q86UE6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms