Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC149Q6ZUS6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC149Q6ZUS6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 CD177P1-201ENST00000606252 935 ntBASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC149Q6ZUS6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
CCDC149Q6ZUS6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 AP003071.4-201ENST00000562276 1284 ntBASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC149Q6ZUS6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 TMPOP1-202ENST00000424642 1267 ntBASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 AL355355.2-201ENST00000442321 338 ntBASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 AL121906.2-201ENST00000621597 723 ntBASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC149Q6ZUS6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 HLA-G-202ENST00000376815 851 ntBASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 HLA-G-203ENST00000376818 1127 ntBASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 AL353708.3-201ENST00000610272 989 ntBASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 CLDN5-201ENST00000403084 2357 ntBASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC149Q6ZUS6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 KRT16P5-201ENST00000455284 522 ntBASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC149Q6ZUS6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms