Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 AL031963.3-201ENST00000606441 850 ntBASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA1Q6ZS62 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 KRT8P20-201ENST00000423953 1409 ntBASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 AC112907.3-201ENST00000577781 2400 ntBASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA1Q6ZS62 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.33■□□□□ 0.37
COLCA1Q6ZS62 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA1Q6ZS62 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.33■□□□□ 0.37
COLCA1Q6ZS62 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA1Q6ZS62 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
COLCA1Q6ZS62 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
COLCA1Q6ZS62 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA1Q6ZS62 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA1Q6ZS62 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.33■□□□□ 0.36
COLCA1Q6ZS62 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 SLC29A4P1-201ENST00000398760 971 ntBASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA1Q6ZS62 AL691432.2-201ENST00000607222 2038 ntBASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA1Q6ZS62 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms