Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 YDR250CYDR250C 276 nt-0.26□□□□□ -2.45
LSM6Q06406 TDA2YER071C 381 nt-0.26□□□□□ -2.45
LSM6Q06406 YER076W-AYER076W-A 348 nt-0.26□□□□□ -2.45
LSM6Q06406 RPL22BYFL034C-A 369 nt-0.26□□□□□ -2.45
LSM6Q06406 YIR018C-AYIR018C-A 138 nt-0.26□□□□□ -2.45
LSM6Q06406 YCL002CYCL002C 792 nt-0.26□□□□□ -2.45
LSM6Q06406 LRP1YHR081W 555 nt-0.27□□□□□ -2.45
LSM6Q06406 YJR079WYJR079W 330 nt-0.27□□□□□ -2.45
LSM6Q06406 YPL197CYPL197C 414 nt-0.27□□□□□ -2.45
LSM6Q06406 BI4Q0120 1917 nt-0.27□□□□□ -2.45
LSM6Q06406 RRI2YOL117W 1938 nt-0.27□□□□□ -2.45
LSM6Q06406 RFX1YLR176C 2436 nt-0.28□□□□□ -2.45
LSM6Q06406 YMR304C-AYMR304C-A 351 nt-0.28□□□□□ -2.45
LSM6Q06406 RPS30BYOR182C 192 nt-0.28□□□□□ -2.45
LSM6Q06406 YEL018C-AYEL018C-A 534 nt-0.29□□□□□ -2.46
LSM6Q06406 LIN1YHR156C 1023 nt-0.29□□□□□ -2.46
LSM6Q06406 RPB10YOR210W 213 nt-0.29□□□□□ -2.46
LSM6Q06406 ZIP2YGL249W 2115 nt-0.29□□□□□ -2.46
LSM6Q06406 LOC1YFR001W 615 nt-0.3□□□□□ -2.46
LSM6Q06406 STE5YDR103W 2754 nt-0.31□□□□□ -2.46
LSM6Q06406 YER138W-AYER138W-A 105 nt-0.31□□□□□ -2.46
LSM6Q06406 IPI3YNL182C 1668 nt-0.31□□□□□ -2.46
LSM6Q06406 YDR029WYDR029W 315 nt-0.32□□□□□ -2.46
LSM6Q06406 YDR371C-AYDR371C-A 105 nt-0.32□□□□□ -2.46
LSM6Q06406 COX3Q0275 810 nt-0.32□□□□□ -2.46
LSM6Q06406 YNL150WYNL150W 408 nt-0.32□□□□□ -2.46
LSM6Q06406 LEE1YPL054W 906 nt-0.32□□□□□ -2.46
LSM6Q06406 snR45snR45 172 nt-0.32□□□□□ -2.46
LSM6Q06406 SRB7YDR308C 423 nt-0.33□□□□□ -2.46
LSM6Q06406 SDS22YKL193C 1017 nt-0.33□□□□□ -2.46
LSM6Q06406 YMR075C-AYMR075C-A 366 nt-0.33□□□□□ -2.46
LSM6Q06406 MCM10YIL150C 1716 nt-0.33□□□□□ -2.46
LSM6Q06406 OST4YDL232W 111 nt-0.34□□□□□ -2.46
LSM6Q06406 YDR220CYDR220C 294 nt-0.34□□□□□ -2.46
LSM6Q06406 WIP1YDR374W-A 270 nt-0.34□□□□□ -2.46
LSM6Q06406 YOR186C-AYOR186C-A 210 nt-0.34□□□□□ -2.46
LSM6Q06406 SPO13YHR014W 876 nt-0.35□□□□□ -2.47
LSM6Q06406 COX5BYIL111W 456 nt-0.35□□□□□ -2.47
LSM6Q06406 PRP21YJL203W 843 nt-0.35□□□□□ -2.47
LSM6Q06406 YNL050CYNL050C 813 nt-0.35□□□□□ -2.47
LSM6Q06406 RPS26AYGL189C 360 nt-0.36□□□□□ -2.47
LSM6Q06406 POL32YJR043C 1053 nt-0.36□□□□□ -2.47
LSM6Q06406 YKL136WYKL136W 399 nt-0.36□□□□□ -2.47
LSM6Q06406 YBR064WYBR064W 429 nt-0.36□□□□□ -2.47
LSM6Q06406 HTB1YDR224C 396 nt-0.37□□□□□ -2.47
LSM6Q06406 OLI1Q0130 231 nt-0.37□□□□□ -2.47
LSM6Q06406 YJL135WYJL135W 318 nt-0.37□□□□□ -2.47
LSM6Q06406 YLR198CYLR198C 360 nt-0.37□□□□□ -2.47
LSM6Q06406 YNL146C-AYNL146C-A 195 nt-0.37□□□□□ -2.47
LSM6Q06406 MYO1YHR023W 5787 nt-0.37□□□□□ -2.47
LSM6Q06406 YDR210WYDR210W 228 nt-0.38□□□□□ -2.47
LSM6Q06406 YDR269CYDR269C 324 nt-0.38□□□□□ -2.47
LSM6Q06406 YER188C-AYER188C-A 300 nt-0.38□□□□□ -2.47
LSM6Q06406 YGR270C-AYGR270C-A 219 nt-0.38□□□□□ -2.47
LSM6Q06406 NFU1YKL040C 771 nt-0.38□□□□□ -2.47
LSM6Q06406 AFB1YLR040C 675 nt-0.38□□□□□ -2.47
LSM6Q06406 YLR271WYLR271W 825 nt-0.38□□□□□ -2.47
LSM6Q06406 YMR013C-AYMR013C-A 150 nt-0.38□□□□□ -2.47
LSM6Q06406 YMR141W-AYMR141W-A 225 nt-0.38□□□□□ -2.47
LSM6Q06406 YMR290W-AYMR290W-A 348 nt-0.38□□□□□ -2.47
LSM6Q06406 YMR321CYMR321C 318 nt-0.38□□□□□ -2.47
LSM6Q06406 YPR160W-AYPR160W-A 81 nt-0.38□□□□□ -2.47
LSM6Q06406 YDL187CYDL187C 330 nt-0.39□□□□□ -2.47
LSM6Q06406 EFR3YMR212C 2349 nt-0.39□□□□□ -2.47
LSM6Q06406 YFR012W-AYFR012W-A 87 nt-0.4□□□□□ -2.47
LSM6Q06406 CWC23YGL128C 852 nt-0.4□□□□□ -2.47
LSM6Q06406 MAM33YIL070C 801 nt-0.4□□□□□ -2.47
LSM6Q06406 ASE1YOR058C 2658 nt-0.41□□□□□ -2.47
LSM6Q06406 snR8snR8 190 nt-0.41□□□□□ -2.48
LSM6Q06406 YER078W-AYER078W-A 165 nt-0.41□□□□□ -2.48
LSM6Q06406 YNL146WYNL146W 303 nt-0.41□□□□□ -2.48
LSM6Q06406 YPL185WYPL185W 396 nt-0.41□□□□□ -2.48
LSM6Q06406 SOV1YMR066W 2697 nt-0.41□□□□□ -2.48
LSM6Q06406 RSM23YGL129C 1353 nt-0.42□□□□□ -2.48
LSM6Q06406 VAM3YOR106W 852 nt-0.43□□□□□ -2.48
LSM6Q06406 YAL067W-AYAL067W-A 228 nt-0.44□□□□□ -2.48
LSM6Q06406 YAR053WYAR053W 297 nt-0.44□□□□□ -2.48
LSM6Q06406 YNL211CYNL211C 261 nt-0.44□□□□□ -2.48
LSM6Q06406 tF(GAA)BtF(GAA)B 73 nt-0.45□□□□□ -2.48
LSM6Q06406 tF(GAA)FtF(GAA)F 73 nt-0.45□□□□□ -2.48
LSM6Q06406 tF(GAA)GtF(GAA)G 73 nt-0.45□□□□□ -2.48
LSM6Q06406 tF(GAA)H1tF(GAA)H1 73 nt-0.45□□□□□ -2.48
LSM6Q06406 tF(GAA)H2tF(GAA)H2 73 nt-0.45□□□□□ -2.48
LSM6Q06406 tF(GAA)MtF(GAA)M 73 nt-0.45□□□□□ -2.48
LSM6Q06406 tF(GAA)P1tF(GAA)P1 73 nt-0.45□□□□□ -2.48
LSM6Q06406 tF(GAA)P2tF(GAA)P2 73 nt-0.45□□□□□ -2.48
LSM6Q06406 YBL008W-AYBL008W-A 240 nt-0.45□□□□□ -2.48
LSM6Q06406 YBR076C-AYBR076C-A 267 nt-0.45□□□□□ -2.48
LSM6Q06406 THO2YNL139C 4794 nt-0.45□□□□□ -2.48
LSM6Q06406 HAL9YOL089C 3093 nt-0.45□□□□□ -2.48
LSM6Q06406 PAA1YDR071C 576 nt-0.46□□□□□ -2.48
LSM6Q06406 YAP6YDR259C 1152 nt-0.46□□□□□ -2.48
LSM6Q06406 YKL068W-AYKL068W-A 237 nt-0.46□□□□□ -2.48
LSM6Q06406 ECM9YKR004C 1134 nt-0.46□□□□□ -2.48
LSM6Q06406 IRC16YPR038W 360 nt-0.46□□□□□ -2.48
LSM6Q06406 NNF2YGR089W 2811 nt-0.46□□□□□ -2.48
LSM6Q06406 COY1YKL179C 2040 nt-0.47□□□□□ -2.48
LSM6Q06406 YKU70YMR284W 1809 nt-0.47□□□□□ -2.48
LSM6Q06406 YGL015CYGL015C 393 nt-0.47□□□□□ -2.48
LSM6Q06406 YLR399W-AYLR399W-A 105 nt-0.47□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 68.3 ms