Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN1P54253 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
ATXN1P54253 AC092720.2-201ENST00000602388 1665 ntBASIC21.14■□□□□ 0.97
ATXN1P54253 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN1P54253 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 GABARAPL3-202ENST00000624044 1851 ntBASIC21.13■□□□□ 0.97
ATXN1P54253 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATXN1P54253 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN1P54253 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 MIR718-201ENST00000390190 70 ntBASIC21.13■□□□□ 0.97
ATXN1P54253 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.13■□□□□ 0.97
ATXN1P54253 LINC01023-201ENST00000606054 436 ntBASIC21.13■□□□□ 0.97
ATXN1P54253 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.13■□□□□ 0.97
ATXN1P54253 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATXN1P54253 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN1P54253 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN1P54253 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.12■□□□□ 0.97
ATXN1P54253 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN1P54253 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.12■□□□□ 0.97
ATXN1P54253 SMG8-203ENST00000578922 2178 ntBASIC21.12■□□□□ 0.97
ATXN1P54253 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ATXN1P54253 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN1P54253 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.12■□□□□ 0.97
ATXN1P54253 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.12■□□□□ 0.97
ATXN1P54253 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.12■□□□□ 0.97
ATXN1P54253 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.12■□□□□ 0.97
ATXN1P54253 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.12■□□□□ 0.97
ATXN1P54253 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.12■□□□□ 0.97
ATXN1P54253 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ATXN1P54253 AC073648.6-201ENST00000641589 218 ntBASIC21.12■□□□□ 0.97
ATXN1P54253 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
ATXN1P54253 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN1P54253 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN1P54253 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN1P54253 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ATXN1P54253 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
ATXN1P54253 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 AL391422.3-201ENST00000603791 2761 ntBASIC21.11■□□□□ 0.97
ATXN1P54253 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ATXN1P54253 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATXN1P54253 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 PGM5P4-201ENST00000421970 445 ntBASIC21.11■□□□□ 0.97
ATXN1P54253 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATXN1P54253 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATXN1P54253 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.11■□□□□ 0.97
ATXN1P54253 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN1P54253 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.1■□□□□ 0.97
ATXN1P54253 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.1■□□□□ 0.97
ATXN1P54253 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.1■□□□□ 0.97
ATXN1P54253 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATXN1P54253 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.1■□□□□ 0.97
ATXN1P54253 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.1■□□□□ 0.97
ATXN1P54253 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.1■□□□□ 0.97
ATXN1P54253 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 LSM12P1-201ENST00000411836 588 ntBASIC21.1■□□□□ 0.97
ATXN1P54253 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATXN1P54253 UNC93B5-201ENST00000530315 699 ntBASIC21.1■□□□□ 0.97
ATXN1P54253 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 AL589743.5-201ENST00000616611 1050 ntBASIC21.1■□□□□ 0.97
ATXN1P54253 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN1P54253 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN1P54253 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ATXN1P54253 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.09■□□□□ 0.97
ATXN1P54253 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.09■□□□□ 0.97
ATXN1P54253 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 AC026366.1-201ENST00000488803 879 ntBASIC21.09■□□□□ 0.97
ATXN1P54253 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.09■□□□□ 0.97
ATXN1P54253 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
ATXN1P54253 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms