Protein–RNA interactions for Protein: P48415

SEC16, COPII coat assembly protein SEC16, yeastyeast

Known RBP Predictions only

Length 2,195 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC16P48415 snR79snR79 84 nt0.08□□□□□ -2.4
SEC16P48415 RPL22BYFL034C-A 369 nt0.08□□□□□ -2.4
SEC16P48415 YHR050W-AYHR050W-A 171 nt0.08□□□□□ -2.4
SEC16P48415 YIL134C-AYIL134C-A 204 nt0.08□□□□□ -2.4
SEC16P48415 YBL068W-AYBL068W-A 237 nt0.08□□□□□ -2.4
SEC16P48415 YEL030C-AYEL030C-A 315 nt0.07□□□□□ -2.4
SEC16P48415 BI4Q0120 1917 nt0.07□□□□□ -2.4
SEC16P48415 LSO2YGR169C-A 279 nt0.06□□□□□ -2.4
SEC16P48415 POL32YJR043C 1053 nt0.06□□□□□ -2.4
SEC16P48415 YMR153C-AYMR153C-A 336 nt0.06□□□□□ -2.4
SEC16P48415 YOL106WYOL106W 354 nt0.06□□□□□ -2.4
SEC16P48415 ACF4YJR083C 930 nt0.06□□□□□ -2.4
SEC16P48415 YBR121C-AYBR121C-A 159 nt0.06□□□□□ -2.4
SEC16P48415 YDR182W-AYDR182W-A 204 nt0.05□□□□□ -2.4
SEC16P48415 SBH1YER087C-B 249 nt0.05□□□□□ -2.4
SEC16P48415 YHR054CYHR054C 1065 nt0.05□□□□□ -2.4
SEC16P48415 TFB6YOR352W 1032 nt0.05□□□□□ -2.4
SEC16P48415 YPR153WYPR153W 423 nt0.05□□□□□ -2.4
SEC16P48415 SLD3YGL113W 2007 nt0.05□□□□□ -2.4
SEC16P48415 YER188C-AYER188C-A 300 nt0.05□□□□□ -2.4
SEC16P48415 GPG1YGL121C 381 nt0.05□□□□□ -2.4
SEC16P48415 YLR271WYLR271W 825 nt0.05□□□□□ -2.4
SEC16P48415 YPL197CYPL197C 414 nt0.05□□□□□ -2.4
SEC16P48415 snR190snR190 190 nt0.05□□□□□ -2.4
SEC16P48415 YBR206WYBR206W 324 nt0.05□□□□□ -2.4
SEC16P48415 IPI3YNL182C 1668 nt0.04□□□□□ -2.4
SEC16P48415 RPC10YHR143W-A 213 nt0.04□□□□□ -2.4
SEC16P48415 PRP21YJL203W 843 nt0.04□□□□□ -2.4
SEC16P48415 GMC2YLR445W 567 nt0.04□□□□□ -2.4
SEC16P48415 RPL26AYLR344W 384 nt0.04□□□□□ -2.4
SEC16P48415 TDA2YER071C 381 nt0.03□□□□□ -2.4
SEC16P48415 CUL3YGR003W 2235 nt0.02□□□□□ -2.41
SEC16P48415 YHL042WYHL042W 453 nt0.02□□□□□ -2.41
SEC16P48415 TIM10YHR005C-A 282 nt0.02□□□□□ -2.41
SEC16P48415 BIG1YHR101C 1008 nt0.02□□□□□ -2.41
SEC16P48415 RPS7BYNL096C 573 nt0.02□□□□□ -2.41
SEC16P48415 LRP1YHR081W 555 nt0.02□□□□□ -2.41
SEC16P48415 YPR170CYPR170C 336 nt0.02□□□□□ -2.41
SEC16P48415 YJR140W-AYJR140W-A 150 nt0.01□□□□□ -2.41
SEC16P48415 YKL136WYKL136W 399 nt0.01□□□□□ -2.41
SEC16P48415 YLR101CYLR101C 396 nt0.01□□□□□ -2.41
SEC16P48415 MLP1YKR095W 5628 nt0.01□□□□□ -2.41
SEC16P48415 TIM8YJR135W-A 264 nt0.01□□□□□ -2.41
SEC16P48415 YPL044CYPL044C 549 nt0.01□□□□□ -2.41
SEC16P48415 YLR146W-AYLR146W-A 189 nt0□□□□□ -2.41
SEC16P48415 CSM4YPL200W 471 nt0□□□□□ -2.41
SEC16P48415 YJL135WYJL135W 318 nt-0.01□□□□□ -2.41
SEC16P48415 YJR079WYJR079W 330 nt-0.01□□□□□ -2.41
SEC16P48415 CUP1-1YHR053C 186 nt-0.01□□□□□ -2.41
SEC16P48415 CUP1-2YHR055C 186 nt-0.01□□□□□ -2.41
SEC16P48415 ZIP2YGL249W 2115 nt-0.01□□□□□ -2.41
SEC16P48415 snR84snR84 550 nt-0.02□□□□□ -2.41
SEC16P48415 RPL35AYDL191W 363 nt-0.02□□□□□ -2.41
SEC16P48415 YGR115CYGR115C 780 nt-0.03□□□□□ -2.41
SEC16P48415 YOR108C-AYOR108C-A 210 nt-0.03□□□□□ -2.41
SEC16P48415 YOR248WYOR248W 303 nt-0.03□□□□□ -2.41
SEC16P48415 YLL032CYLL032C 2478 nt-0.03□□□□□ -2.41
SEC16P48415 CDC33YOL139C 642 nt-0.04□□□□□ -2.42
SEC16P48415 YPL225WYPL225W 441 nt-0.04□□□□□ -2.42
SEC16P48415 YBR071WYBR071W 636 nt-0.04□□□□□ -2.42
SEC16P48415 YDR220CYDR220C 294 nt-0.04□□□□□ -2.42
SEC16P48415 YMR013C-AYMR013C-A 150 nt-0.04□□□□□ -2.42
SEC16P48415 LEE1YPL054W 906 nt-0.04□□□□□ -2.42
SEC16P48415 AFB1YLR040C 675 nt-0.05□□□□□ -2.42
SEC16P48415 YPL185WYPL185W 396 nt-0.05□□□□□ -2.42
SEC16P48415 VMA21YGR105W 234 nt-0.05□□□□□ -2.42
SEC16P48415 YNL146C-AYNL146C-A 195 nt-0.05□□□□□ -2.42
SEC16P48415 YNL150WYNL150W 408 nt-0.05□□□□□ -2.42
SEC16P48415 VAM3YOR106W 852 nt-0.05□□□□□ -2.42
SEC16P48415 NPC2YDL046W 522 nt-0.06□□□□□ -2.42
SEC16P48415 YIR018C-AYIR018C-A 138 nt-0.06□□□□□ -2.42
SEC16P48415 NOP9YJL010C 2001 nt-0.06□□□□□ -2.42
SEC16P48415 OLI1Q0130 231 nt-0.07□□□□□ -2.42
SEC16P48415 YBR064WYBR064W 429 nt-0.07□□□□□ -2.42
SEC16P48415 SEC8YPR055W 3198 nt-0.07□□□□□ -2.42
SEC16P48415 PRP5YBR237W 2550 nt-0.08□□□□□ -2.42
SEC16P48415 YLR217WYLR217W 324 nt-0.08□□□□□ -2.42
SEC16P48415 YLR252WYLR252W 306 nt-0.08□□□□□ -2.42
SEC16P48415 RFX1YLR176C 2436 nt-0.08□□□□□ -2.42
SEC16P48415 PRP42YDR235W 1635 nt-0.08□□□□□ -2.42
SEC16P48415 PTP2YOR208W 2253 nt-0.08□□□□□ -2.42
SEC16P48415 YCR038W-AYCR038W-A 126 nt-0.08□□□□□ -2.42
SEC16P48415 YGL015CYGL015C 393 nt-0.08□□□□□ -2.42
SEC16P48415 YPR096CYPR096C 303 nt-0.08□□□□□ -2.42
SEC16P48415 COG6YNL041C 2520 nt-0.09□□□□□ -2.42
SEC16P48415 EFR3YMR212C 2349 nt-0.09□□□□□ -2.42
SEC16P48415 RSM23YGL129C 1353 nt-0.09□□□□□ -2.42
SEC16P48415 snR5snR5 204 nt-0.09□□□□□ -2.42
SEC16P48415 QCR7YDR529C 384 nt-0.09□□□□□ -2.42
SEC16P48415 MRPL50YNR022C 420 nt-0.09□□□□□ -2.42
SEC16P48415 RCN2YOR220W 798 nt-0.09□□□□□ -2.42
SEC16P48415 YDR269CYDR269C 324 nt-0.1□□□□□ -2.43
SEC16P48415 YBL008W-AYBL008W-A 240 nt-0.1□□□□□ -2.43
SEC16P48415 BSC3YLR465C 309 nt-0.1□□□□□ -2.43
SEC16P48415 YDR029WYDR029W 315 nt-0.11□□□□□ -2.43
SEC16P48415 CWC23YGL128C 852 nt-0.11□□□□□ -2.43
SEC16P48415 MRPL31YKL138C 396 nt-0.11□□□□□ -2.43
SEC16P48415 YMR290W-AYMR290W-A 348 nt-0.11□□□□□ -2.43
SEC16P48415 YCL002CYCL002C 792 nt-0.11□□□□□ -2.43
SEC16P48415 FYV10YIL097W 1551 nt-0.11□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 60.6 ms