Protein–RNA interactions for Protein: P40560

YIL001W, Ankyrin repeat-containing protein YIL001W, yeastyeast

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YIL001WP40560 MPT5YGL178W 2580 nt0.8□□□□□ -2.28
YIL001WP40560 SWI6YLR182W 2412 nt0.79□□□□□ -2.28
YIL001WP40560 SET3YKR029C 2256 nt0.79□□□□□ -2.28
YIL001WP40560 RPL16AYIL133C 600 nt0.79□□□□□ -2.28
YIL001WP40560 MRPL31YKL138C 396 nt0.79□□□□□ -2.28
YIL001WP40560 NUP157YER105C 4176 nt0.78□□□□□ -2.28
YIL001WP40560 SCW11YGL028C 1629 nt0.78□□□□□ -2.28
YIL001WP40560 SLD3YGL113W 2007 nt0.78□□□□□ -2.28
YIL001WP40560 YER087C-AYER087C-A 552 nt0.78□□□□□ -2.28
YIL001WP40560 UPS1YLR193C 528 nt0.78□□□□□ -2.28
YIL001WP40560 YNL122CYNL122C 348 nt0.78□□□□□ -2.28
YIL001WP40560 YPL182CYPL182C 384 nt0.78□□□□□ -2.28
YIL001WP40560 YBR221W-AYBR221W-A 105 nt0.78□□□□□ -2.28
YIL001WP40560 PRP16YKR086W 3216 nt0.77□□□□□ -2.29
YIL001WP40560 YDR269CYDR269C 324 nt0.77□□□□□ -2.29
YIL001WP40560 CYC7YEL039C 342 nt0.77□□□□□ -2.29
YIL001WP40560 YHR125WYHR125W 306 nt0.77□□□□□ -2.29
YIL001WP40560 YNL303WYNL303W 348 nt0.77□□□□□ -2.29
YIL001WP40560 AIM9YER080W 1884 nt0.77□□□□□ -2.29
YIL001WP40560 YDL073WYDL073W 2955 nt0.76□□□□□ -2.29
YIL001WP40560 SEC1YDR164C 2175 nt0.76□□□□□ -2.29
YIL001WP40560 BI2Q0110 1272 nt0.76□□□□□ -2.29
YIL001WP40560 YIL059CYIL059C 366 nt0.76□□□□□ -2.29
YIL001WP40560 snR189snR189 189 nt0.76□□□□□ -2.29
YIL001WP40560 SLY1YDR189W 2001 nt0.76□□□□□ -2.29
YIL001WP40560 YHR130CYHR130C 336 nt0.75□□□□□ -2.29
YIL001WP40560 TOM22YNL131W 459 nt0.75□□□□□ -2.29
YIL001WP40560 ZEO1YOL109W 342 nt0.75□□□□□ -2.29
YIL001WP40560 RRT1YBL048W 312 nt0.74□□□□□ -2.29
YIL001WP40560 YBL071CYBL071C 309 nt0.74□□□□□ -2.29
YIL001WP40560 YOR199WYOR199W 330 nt0.74□□□□□ -2.29
YIL001WP40560 LCD1YDR499W 2244 nt0.73□□□□□ -2.29
YIL001WP40560 STO1YMR125W 2586 nt0.73□□□□□ -2.29
YIL001WP40560 NHP2YDL208W 471 nt0.73□□□□□ -2.29
YIL001WP40560 YIL142C-AYIL142C-A 333 nt0.73□□□□□ -2.29
YIL001WP40560 RPS30BYOR182C 192 nt0.73□□□□□ -2.29
YIL001WP40560 RIM20YOR275C 1986 nt0.72□□□□□ -2.29
YIL001WP40560 AIM44YPL158C 2277 nt0.72□□□□□ -2.29
YIL001WP40560 YDL011CYDL011C 324 nt0.72□□□□□ -2.29
YIL001WP40560 TIM13YGR181W 318 nt0.72□□□□□ -2.29
YIL001WP40560 UBC7YMR022W 498 nt0.72□□□□□ -2.29
YIL001WP40560 YBR200W-AYBR200W-A 165 nt0.72□□□□□ -2.29
YIL001WP40560 FIG4YNL325C 2640 nt0.72□□□□□ -2.29
YIL001WP40560 PDE2YOR360C 1581 nt0.71□□□□□ -2.3
YIL001WP40560 NPC2YDL046W 522 nt0.71□□□□□ -2.3
YIL001WP40560 YLR171WYLR171W 390 nt0.71□□□□□ -2.3
YIL001WP40560 LOA1YPR139C 903 nt0.71□□□□□ -2.3
YIL001WP40560 snR41snR41 95 nt0.71□□□□□ -2.3
YIL001WP40560 EFR3YMR212C 2349 nt0.71□□□□□ -2.3
YIL001WP40560 YDR521WYDR521W 336 nt0.7□□□□□ -2.3
YIL001WP40560 YKL202WYKL202W 582 nt0.7□□□□□ -2.3
YIL001WP40560 YLR287CYLR287C 1068 nt0.7□□□□□ -2.3
YIL001WP40560 CMC4YMR194C-B 222 nt0.7□□□□□ -2.3
YIL001WP40560 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
YIL001WP40560 YOL013W-BYOL013W-B 291 nt0.7□□□□□ -2.3
YIL001WP40560 snR54snR54 86 nt0.7□□□□□ -2.3
YIL001WP40560 YJR003CYJR003C 1560 nt0.7□□□□□ -2.3
YIL001WP40560 MMS4YBR098W 2076 nt0.69□□□□□ -2.3
YIL001WP40560 SLI15YBR156C 2097 nt0.69□□□□□ -2.3
YIL001WP40560 UTP20YBL004W 7482 nt0.69□□□□□ -2.3
YIL001WP40560 CBS1YDL069C 690 nt0.69□□□□□ -2.3
YIL001WP40560 ZIP2YGL249W 2115 nt0.69□□□□□ -2.3
YIL001WP40560 YGR042WYGR042W 816 nt0.69□□□□□ -2.3
YIL001WP40560 INA22YIR024C 651 nt0.69□□□□□ -2.3
YIL001WP40560 YJL020W-AYJL020W-A 258 nt0.69□□□□□ -2.3
YIL001WP40560 RPS27AYKL156W 249 nt0.69□□□□□ -2.3
YIL001WP40560 ATP19YOL077W-A 207 nt0.69□□□□□ -2.3
YIL001WP40560 RKR1YMR247C 4689 nt0.69□□□□□ -2.3
YIL001WP40560 PAN2YGL094C 3348 nt0.68□□□□□ -2.3
YIL001WP40560 tF(GAA)BtF(GAA)B 73 nt0.68□□□□□ -2.3
YIL001WP40560 tF(GAA)FtF(GAA)F 73 nt0.68□□□□□ -2.3
YIL001WP40560 tF(GAA)GtF(GAA)G 73 nt0.68□□□□□ -2.3
YIL001WP40560 tF(GAA)H1tF(GAA)H1 73 nt0.68□□□□□ -2.3
YIL001WP40560 tF(GAA)H2tF(GAA)H2 73 nt0.68□□□□□ -2.3
YIL001WP40560 tF(GAA)MtF(GAA)M 73 nt0.68□□□□□ -2.3
YIL001WP40560 tF(GAA)P1tF(GAA)P1 73 nt0.68□□□□□ -2.3
YIL001WP40560 tF(GAA)P2tF(GAA)P2 73 nt0.68□□□□□ -2.3
YIL001WP40560 YJL135WYJL135W 318 nt0.68□□□□□ -2.3
YIL001WP40560 YLR101CYLR101C 396 nt0.68□□□□□ -2.3
YIL001WP40560 YDL206WYDL206W 2289 nt0.68□□□□□ -2.3
YIL001WP40560 snR72snR72 98 nt0.67□□□□□ -2.3
YIL001WP40560 YDL196WYDL196W 330 nt0.67□□□□□ -2.3
YIL001WP40560 YHL041WYHL041W 450 nt0.67□□□□□ -2.3
YIL001WP40560 DIE2YGR227W 1578 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)BtT(AGU)B 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)CtT(AGU)C 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)DtT(AGU)D 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)HtT(AGU)H 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)I1tT(AGU)I1 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)I2tT(AGU)I2 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)JtT(AGU)J 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)N1tT(AGU)N1 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)N2tT(AGU)N2 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)O1tT(AGU)O1 73 nt0.66□□□□□ -2.3
YIL001WP40560 tT(AGU)O2tT(AGU)O2 73 nt0.66□□□□□ -2.3
YIL001WP40560 YMR031W-AYMR031W-A 327 nt0.66□□□□□ -2.3
YIL001WP40560 YOL160WYOL160W 342 nt0.66□□□□□ -2.3
YIL001WP40560 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
YIL001WP40560 OST1YJL002C 1431 nt0.65□□□□□ -2.3
YIL001WP40560 ECL1YGR146C 636 nt0.65□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms