Protein–RNA interactions for Protein: P40045

TDA2, Topoisomerase I damage affected protein 2, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA2P40045 MLP2YIL149C 5040 nt-0.21□□□□□ -2.44
TDA2P40045 tF(GAA)BtF(GAA)B 73 nt-0.22□□□□□ -2.44
TDA2P40045 tF(GAA)FtF(GAA)F 73 nt-0.22□□□□□ -2.44
TDA2P40045 tF(GAA)GtF(GAA)G 73 nt-0.22□□□□□ -2.44
TDA2P40045 tF(GAA)H1tF(GAA)H1 73 nt-0.22□□□□□ -2.44
TDA2P40045 tF(GAA)H2tF(GAA)H2 73 nt-0.22□□□□□ -2.44
TDA2P40045 tF(GAA)MtF(GAA)M 73 nt-0.22□□□□□ -2.44
TDA2P40045 tF(GAA)P1tF(GAA)P1 73 nt-0.22□□□□□ -2.44
TDA2P40045 tF(GAA)P2tF(GAA)P2 73 nt-0.22□□□□□ -2.44
TDA2P40045 YER076W-AYER076W-A 348 nt-0.22□□□□□ -2.44
TDA2P40045 TIM10YHR005C-A 282 nt-0.22□□□□□ -2.44
TDA2P40045 TFB6YOR352W 1032 nt-0.22□□□□□ -2.44
TDA2P40045 MYO1YHR023W 5787 nt-0.22□□□□□ -2.44
TDA2P40045 SEC8YPR055W 3198 nt-0.22□□□□□ -2.44
TDA2P40045 BI4Q0120 1917 nt-0.23□□□□□ -2.45
TDA2P40045 SRB7YDR308C 423 nt-0.23□□□□□ -2.45
TDA2P40045 LIN1YHR156C 1023 nt-0.23□□□□□ -2.45
TDA2P40045 COX3Q0275 810 nt-0.23□□□□□ -2.45
TDA2P40045 YPL044CYPL044C 549 nt-0.23□□□□□ -2.45
TDA2P40045 CSM4YPL200W 471 nt-0.23□□□□□ -2.45
TDA2P40045 RFX1YLR176C 2436 nt-0.23□□□□□ -2.45
TDA2P40045 INP2YMR163C 2118 nt-0.23□□□□□ -2.45
TDA2P40045 CUL3YGR003W 2235 nt-0.23□□□□□ -2.45
TDA2P40045 YJR079WYJR079W 330 nt-0.24□□□□□ -2.45
TDA2P40045 snR45snR45 172 nt-0.24□□□□□ -2.45
TDA2P40045 YCL002CYCL002C 792 nt-0.24□□□□□ -2.45
TDA2P40045 RPL35AYDL191W 363 nt-0.25□□□□□ -2.45
TDA2P40045 YEL018C-AYEL018C-A 534 nt-0.25□□□□□ -2.45
TDA2P40045 YER078W-AYER078W-A 165 nt-0.25□□□□□ -2.45
TDA2P40045 ULI1YFR026C 510 nt-0.25□□□□□ -2.45
TDA2P40045 ORC3YLL004W 1851 nt-0.25□□□□□ -2.45
TDA2P40045 RCO1YMR075W 2055 nt-0.25□□□□□ -2.45
TDA2P40045 ZIP2YGL249W 2115 nt-0.26□□□□□ -2.45
TDA2P40045 RPS27AYKL156W 249 nt-0.26□□□□□ -2.45
TDA2P40045 YGR270C-AYGR270C-A 219 nt-0.27□□□□□ -2.45
TDA2P40045 SDS22YKL193C 1017 nt-0.27□□□□□ -2.45
TDA2P40045 YIR018C-AYIR018C-A 138 nt-0.28□□□□□ -2.45
TDA2P40045 YNL150WYNL150W 408 nt-0.28□□□□□ -2.45
TDA2P40045 YDR220CYDR220C 294 nt-0.29□□□□□ -2.46
TDA2P40045 YER138W-AYER138W-A 105 nt-0.29□□□□□ -2.46
TDA2P40045 YNL146C-AYNL146C-A 195 nt-0.29□□□□□ -2.46
TDA2P40045 HTB1YDR224C 396 nt-0.3□□□□□ -2.46
TDA2P40045 POL32YJR043C 1053 nt-0.3□□□□□ -2.46
TDA2P40045 RPB10YOR210W 213 nt-0.3□□□□□ -2.46
TDA2P40045 MCM10YIL150C 1716 nt-0.3□□□□□ -2.46
TDA2P40045 YDR371C-AYDR371C-A 105 nt-0.31□□□□□ -2.46
TDA2P40045 LEE1YPL054W 906 nt-0.31□□□□□ -2.46
TDA2P40045 THO2YNL139C 4794 nt-0.32□□□□□ -2.46
TDA2P40045 YDR029WYDR029W 315 nt-0.32□□□□□ -2.46
TDA2P40045 COX5BYIL111W 456 nt-0.32□□□□□ -2.46
TDA2P40045 YMR013C-AYMR013C-A 150 nt-0.32□□□□□ -2.46
TDA2P40045 IPI3YNL182C 1668 nt-0.33□□□□□ -2.46
TDA2P40045 YER188C-AYER188C-A 300 nt-0.33□□□□□ -2.46
TDA2P40045 YNL050CYNL050C 813 nt-0.33□□□□□ -2.46
TDA2P40045 YOL014WYOL014W 375 nt-0.33□□□□□ -2.46
TDA2P40045 YJL135WYJL135W 318 nt-0.34□□□□□ -2.46
TDA2P40045 YBR064WYBR064W 429 nt-0.34□□□□□ -2.46
TDA2P40045 OST4YDL232W 111 nt-0.35□□□□□ -2.47
TDA2P40045 YDR269CYDR269C 324 nt-0.35□□□□□ -2.47
TDA2P40045 CWC23YGL128C 852 nt-0.35□□□□□ -2.47
TDA2P40045 PRP21YJL203W 843 nt-0.35□□□□□ -2.47
TDA2P40045 YLR271WYLR271W 825 nt-0.35□□□□□ -2.47
TDA2P40045 VAM3YOR106W 852 nt-0.35□□□□□ -2.47
TDA2P40045 YOR186C-AYOR186C-A 210 nt-0.35□□□□□ -2.47
TDA2P40045 YDR210WYDR210W 228 nt-0.36□□□□□ -2.47
TDA2P40045 OLI1Q0130 231 nt-0.36□□□□□ -2.47
TDA2P40045 STF2YGR008C 255 nt-0.36□□□□□ -2.47
TDA2P40045 YMR290W-AYMR290W-A 348 nt-0.36□□□□□ -2.47
TDA2P40045 RPS26AYGL189C 360 nt-0.37□□□□□ -2.47
TDA2P40045 YKL136WYKL136W 399 nt-0.37□□□□□ -2.47
TDA2P40045 AFB1YLR040C 675 nt-0.37□□□□□ -2.47
TDA2P40045 YLR198CYLR198C 360 nt-0.38□□□□□ -2.47
TDA2P40045 YMR141W-AYMR141W-A 225 nt-0.38□□□□□ -2.47
TDA2P40045 YDL187CYDL187C 330 nt-0.39□□□□□ -2.47
TDA2P40045 MAM33YIL070C 801 nt-0.39□□□□□ -2.47
TDA2P40045 NFU1YKL040C 771 nt-0.39□□□□□ -2.47
TDA2P40045 YAR053WYAR053W 297 nt-0.39□□□□□ -2.47
TDA2P40045 RSM23YGL129C 1353 nt-0.4□□□□□ -2.47
TDA2P40045 YFR012W-AYFR012W-A 87 nt-0.4□□□□□ -2.47
TDA2P40045 YMR321CYMR321C 318 nt-0.4□□□□□ -2.47
TDA2P40045 YPR160W-AYPR160W-A 81 nt-0.4□□□□□ -2.47
TDA2P40045 ASE1YOR058C 2658 nt-0.41□□□□□ -2.47
TDA2P40045 YGL015CYGL015C 393 nt-0.41□□□□□ -2.48
TDA2P40045 SLX9YGR081C 633 nt-0.41□□□□□ -2.48
TDA2P40045 YBL008W-AYBL008W-A 240 nt-0.41□□□□□ -2.48
TDA2P40045 YPL185WYPL185W 396 nt-0.41□□□□□ -2.48
TDA2P40045 YPR096CYPR096C 303 nt-0.41□□□□□ -2.48
TDA2P40045 YNL146WYNL146W 303 nt-0.42□□□□□ -2.48
TDA2P40045 EFR3YMR212C 2349 nt-0.42□□□□□ -2.48
TDA2P40045 YAL067W-AYAL067W-A 228 nt-0.44□□□□□ -2.48
TDA2P40045 HUG1YML058W-A 207 nt-0.44□□□□□ -2.48
TDA2P40045 IRC16YPR038W 360 nt-0.44□□□□□ -2.48
TDA2P40045 snR8snR8 190 nt-0.45□□□□□ -2.48
TDA2P40045 PAA1YDR071C 576 nt-0.45□□□□□ -2.48
TDA2P40045 YAP6YDR259C 1152 nt-0.45□□□□□ -2.48
TDA2P40045 YNL211CYNL211C 261 nt-0.45□□□□□ -2.48
TDA2P40045 YBR076C-AYBR076C-A 267 nt-0.45□□□□□ -2.48
TDA2P40045 SOV1YMR066W 2697 nt-0.45□□□□□ -2.48
TDA2P40045 PHS1YJL097W 654 nt-0.46□□□□□ -2.48
TDA2P40045 YLR217WYLR217W 324 nt-0.46□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms