Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YDR008CYDR008C 351 nt-0.26□□□□□ -2.45
SSN2P38931 15S_rRNA15S_rRNA 1649 nt-0.26□□□□□ -2.45
SSN2P38931 YDR344CYDR344C 444 nt-0.27□□□□□ -2.45
SSN2P38931 YLR163W-AYLR163W-A 114 nt-0.27□□□□□ -2.45
SSN2P38931 CSM4YPL200W 471 nt-0.27□□□□□ -2.45
SSN2P38931 snR79snR79 84 nt-0.28□□□□□ -2.45
SSN2P38931 ATC1YDR184C 885 nt-0.28□□□□□ -2.45
SSN2P38931 GPG1YGL121C 381 nt-0.28□□□□□ -2.45
SSN2P38931 IRC13YOR235W 315 nt-0.28□□□□□ -2.45
SSN2P38931 YOR366WYOR366W 354 nt-0.28□□□□□ -2.45
SSN2P38931 YLL032CYLL032C 2478 nt-0.29□□□□□ -2.46
SSN2P38931 NPC2YDL046W 522 nt-0.29□□□□□ -2.46
SSN2P38931 DFG10YIL049W 762 nt-0.29□□□□□ -2.46
SSN2P38931 YIR018C-AYIR018C-A 138 nt-0.29□□□□□ -2.46
SSN2P38931 SPC24YMR117C 642 nt-0.29□□□□□ -2.46
SSN2P38931 YOR020W-AYOR020W-A 273 nt-0.29□□□□□ -2.46
SSN2P38931 YPR099CYPR099C 357 nt-0.29□□□□□ -2.46
SSN2P38931 YFR057WYFR057W 456 nt-0.3□□□□□ -2.46
SSN2P38931 PSF2YJL072C 642 nt-0.3□□□□□ -2.46
SSN2P38931 YKL136WYKL136W 399 nt-0.3□□□□□ -2.46
SSN2P38931 PAN3YKL025C 2040 nt-0.3□□□□□ -2.46
SSN2P38931 YDR210WYDR210W 228 nt-0.3□□□□□ -2.46
SSN2P38931 YNL050CYNL050C 813 nt-0.3□□□□□ -2.46
SSN2P38931 YCL002CYCL002C 792 nt-0.3□□□□□ -2.46
SSN2P38931 ORC3YLL004W 1851 nt-0.31□□□□□ -2.46
SSN2P38931 DAD1YDR016C 285 nt-0.31□□□□□ -2.46
SSN2P38931 IRC2YDR112W 309 nt-0.31□□□□□ -2.46
SSN2P38931 TDA2YER071C 381 nt-0.31□□□□□ -2.46
SSN2P38931 YER158W-AYER158W-A 216 nt-0.31□□□□□ -2.46
SSN2P38931 YGL204CYGL204C 306 nt-0.31□□□□□ -2.46
SSN2P38931 GIM5YML094W 492 nt-0.31□□□□□ -2.46
SSN2P38931 CDC33YOL139C 642 nt-0.31□□□□□ -2.46
SSN2P38931 snR59snR59 78 nt-0.32□□□□□ -2.46
SSN2P38931 YDL187CYDL187C 330 nt-0.32□□□□□ -2.46
SSN2P38931 QCR7YDR529C 384 nt-0.32□□□□□ -2.46
SSN2P38931 RMD6YEL072W 696 nt-0.32□□□□□ -2.46
SSN2P38931 TIM10YHR005C-A 282 nt-0.32□□□□□ -2.46
SSN2P38931 MRPL31YKL138C 396 nt-0.32□□□□□ -2.46
SSN2P38931 YMR153C-AYMR153C-A 336 nt-0.32□□□□□ -2.46
SSN2P38931 TFB6YOR352W 1032 nt-0.32□□□□□ -2.46
SSN2P38931 YBR206WYBR206W 324 nt-0.32□□□□□ -2.46
SSN2P38931 YDR029WYDR029W 315 nt-0.33□□□□□ -2.46
SSN2P38931 YJR140W-AYJR140W-A 150 nt-0.33□□□□□ -2.46
SSN2P38931 YNL150WYNL150W 408 nt-0.33□□□□□ -2.46
SSN2P38931 YPR170W-AYPR170W-A 186 nt-0.33□□□□□ -2.46
SSN2P38931 YDR371C-AYDR371C-A 105 nt-0.34□□□□□ -2.46
SSN2P38931 YPL044CYPL044C 549 nt-0.34□□□□□ -2.46
SSN2P38931 snR44snR44 211 nt-0.34□□□□□ -2.46
SSN2P38931 CUL3YGR003W 2235 nt-0.34□□□□□ -2.46
SSN2P38931 RUB1YDR139C 234 nt-0.35□□□□□ -2.47
SSN2P38931 tT(UGU)Q1tT(UGU)Q1 76 nt-0.35□□□□□ -2.47
SSN2P38931 GPX1YKL026C 504 nt-0.35□□□□□ -2.47
SSN2P38931 YLR146W-AYLR146W-A 189 nt-0.35□□□□□ -2.47
SSN2P38931 YOR186C-AYOR186C-A 210 nt-0.35□□□□□ -2.47
SSN2P38931 YPL197CYPL197C 414 nt-0.35□□□□□ -2.47
SSN2P38931 YBR071WYBR071W 636 nt-0.35□□□□□ -2.47
SSN2P38931 YHR054CYHR054C 1065 nt-0.37□□□□□ -2.47
SSN2P38931 COX5BYIL111W 456 nt-0.37□□□□□ -2.47
SSN2P38931 COX7YMR256C 183 nt-0.37□□□□□ -2.47
SSN2P38931 LEE1YPL054W 906 nt-0.37□□□□□ -2.47
SSN2P38931 YPL225WYPL225W 441 nt-0.37□□□□□ -2.47
SSN2P38931 EFR3YMR212C 2349 nt-0.37□□□□□ -2.47
SSN2P38931 SOV1YMR066W 2697 nt-0.37□□□□□ -2.47
SSN2P38931 YER076W-AYER076W-A 348 nt-0.38□□□□□ -2.47
SSN2P38931 YJR079WYJR079W 330 nt-0.38□□□□□ -2.47
SSN2P38931 YOL106WYOL106W 354 nt-0.38□□□□□ -2.47
SSN2P38931 YBR121C-AYBR121C-A 159 nt-0.38□□□□□ -2.47
SSN2P38931 RFX1YLR176C 2436 nt-0.38□□□□□ -2.47
SSN2P38931 BI4Q0120 1917 nt-0.38□□□□□ -2.47
SSN2P38931 ASE1YOR058C 2658 nt-0.38□□□□□ -2.47
SSN2P38931 OST4YDL232W 111 nt-0.38□□□□□ -2.47
SSN2P38931 RPS26AYGL189C 360 nt-0.38□□□□□ -2.47
SSN2P38931 YPL119C-AYPL119C-A 264 nt-0.38□□□□□ -2.47
SSN2P38931 YPL185WYPL185W 396 nt-0.38□□□□□ -2.47
SSN2P38931 PRP21YJL203W 843 nt-0.39□□□□□ -2.47
SSN2P38931 YER138W-AYER138W-A 105 nt-0.4□□□□□ -2.47
SSN2P38931 RPS30AYLR287C-A 192 nt-0.4□□□□□ -2.47
SSN2P38931 PTP2YOR208W 2253 nt-0.41□□□□□ -2.47
SSN2P38931 snR8snR8 190 nt-0.41□□□□□ -2.48
SSN2P38931 YAL067W-AYAL067W-A 228 nt-0.41□□□□□ -2.48
SSN2P38931 YLR271WYLR271W 825 nt-0.41□□□□□ -2.48
SSN2P38931 ZIP2YGL249W 2115 nt-0.41□□□□□ -2.48
SSN2P38931 AFB1YLR040C 675 nt-0.42□□□□□ -2.48
SSN2P38931 YNL211CYNL211C 261 nt-0.42□□□□□ -2.48
SSN2P38931 YOR364WYOR364W 369 nt-0.42□□□□□ -2.48
SSN2P38931 YBR064WYBR064W 429 nt-0.42□□□□□ -2.48
SSN2P38931 MCM10YIL150C 1716 nt-0.42□□□□□ -2.48
SSN2P38931 RAD61YDR014W 1944 nt-0.43□□□□□ -2.48
SSN2P38931 SDS22YKL193C 1017 nt-0.43□□□□□ -2.48
SSN2P38931 YPR160W-AYPR160W-A 81 nt-0.43□□□□□ -2.48
SSN2P38931 SBH2YER019C-A 267 nt-0.44□□□□□ -2.48
SSN2P38931 MAM33YIL070C 801 nt-0.44□□□□□ -2.48
SSN2P38931 ACF4YJR083C 930 nt-0.44□□□□□ -2.48
SSN2P38931 YMR141W-AYMR141W-A 225 nt-0.44□□□□□ -2.48
SSN2P38931 ATG16YMR159C 453 nt-0.45□□□□□ -2.48
SSN2P38931 YHR050W-AYHR050W-A 171 nt-0.46□□□□□ -2.48
SSN2P38931 YJL135WYJL135W 318 nt-0.46□□□□□ -2.48
SSN2P38931 NFU1YKL040C 771 nt-0.46□□□□□ -2.48
SSN2P38931 YKL111CYKL111C 336 nt-0.46□□□□□ -2.48
SSN2P38931 YMR290W-AYMR290W-A 348 nt-0.46□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 95.9 ms