Protein–RNA interactions for Protein: P38759

VPS29, Vacuolar protein sorting-associated protein 29, yeastyeast

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS29P38759 RPS22AYJL190C 393 nt3.67□□□□□ -1.82
VPS29P38759 DAN4YJR151C 3486 nt3.67□□□□□ -1.82
VPS29P38759 tV(CAC)DtV(CAC)D 73 nt3.66□□□□□ -1.82
VPS29P38759 tV(CAC)HtV(CAC)H 73 nt3.66□□□□□ -1.82
VPS29P38759 MGM1YOR211C 2646 nt3.66□□□□□ -1.82
VPS29P38759 ALK1YGL021W 2283 nt3.65□□□□□ -1.83
VPS29P38759 APL2YKL135C 2181 nt3.65□□□□□ -1.83
VPS29P38759 NEW1YPL226W 3591 nt3.64□□□□□ -1.83
VPS29P38759 VMR1YHL035C 4779 nt3.64□□□□□ -1.83
VPS29P38759 BIR1YJR089W 2865 nt3.64□□□□□ -1.83
VPS29P38759 YDR521WYDR521W 336 nt3.64□□□□□ -1.83
VPS29P38759 RPS28BYLR264W 204 nt3.64□□□□□ -1.83
VPS29P38759 SSM4YIL030C 3960 nt3.64□□□□□ -1.83
VPS29P38759 GAL11YOL051W 3246 nt3.63□□□□□ -1.83
VPS29P38759 NOP14YDL148C 2433 nt3.63□□□□□ -1.83
VPS29P38759 BFR2YDR299W 1605 nt3.63□□□□□ -1.83
VPS29P38759 VAS1YGR094W 3315 nt3.63□□□□□ -1.83
VPS29P38759 YGR240C-AYGR240C-A 201 nt3.63□□□□□ -1.83
VPS29P38759 YBR109W-AYBR109W-A 225 nt3.63□□□□□ -1.83
VPS29P38759 ENV11YGR071C 2583 nt3.63□□□□□ -1.83
VPS29P38759 ENA5YDR038C 3276 nt3.63□□□□□ -1.83
VPS29P38759 ENA2YDR039C 3276 nt3.63□□□□□ -1.83
VPS29P38759 ENA1YDR040C 3276 nt3.63□□□□□ -1.83
VPS29P38759 RPA135YPR010C 3612 nt3.62□□□□□ -1.83
VPS29P38759 YER078W-AYER078W-A 165 nt3.61□□□□□ -1.83
VPS29P38759 ROM1YGR070W 3468 nt3.61□□□□□ -1.83
VPS29P38759 RPO41YFL036W 4056 nt3.6□□□□□ -1.83
VPS29P38759 YOR296WYOR296W 3870 nt3.6□□□□□ -1.83
VPS29P38759 snR50snR50 90 nt3.6□□□□□ -1.83
VPS29P38759 DSE4YNR067C 3354 nt3.59□□□□□ -1.83
VPS29P38759 PKH1YDR490C 2301 nt3.59□□□□□ -1.84
VPS29P38759 SDC25YLL016W 3147 nt3.59□□□□□ -1.84
VPS29P38759 ALA1YOR335C 2877 nt3.58□□□□□ -1.84
VPS29P38759 YOR394C-AYOR394C-A 168 nt3.58□□□□□ -1.84
VPS29P38759 KAP120YPL125W 3099 nt3.58□□□□□ -1.84
VPS29P38759 SWR1YDR334W 4545 nt3.58□□□□□ -1.84
VPS29P38759 UBP1YDL122W 2430 nt3.58□□□□□ -1.84
VPS29P38759 RPL37BYDR500C 267 nt3.57□□□□□ -1.84
VPS29P38759 UBP15YMR304W 3693 nt3.57□□□□□ -1.84
VPS29P38759 SEC1YDR164C 2175 nt3.56□□□□□ -1.84
VPS29P38759 POL3YDL102W 3294 nt3.56□□□□□ -1.84
VPS29P38759 snR64snR64 101 nt3.56□□□□□ -1.84
VPS29P38759 YOL164W-AYOL164W-A 183 nt3.56□□□□□ -1.84
VPS29P38759 FLO5YHR211W 3228 nt3.56□□□□□ -1.84
VPS29P38759 CDC53YDL132W 2448 nt3.55□□□□□ -1.84
VPS29P38759 TAH1YCR060W 336 nt3.55□□□□□ -1.84
VPS29P38759 YJL127W-AYJL127W-A 117 nt3.55□□□□□ -1.84
VPS29P38759 YKL100W-AYKL100W-A 90 nt3.55□□□□□ -1.84
VPS29P38759 ISW1YBR245C 3390 nt3.55□□□□□ -1.84
VPS29P38759 SMC3YJL074C 3693 nt3.54□□□□□ -1.84
VPS29P38759 DBP10YDL031W 2988 nt3.54□□□□□ -1.84
VPS29P38759 NFT1YKR103W 3657 nt3.54□□□□□ -1.84
VPS29P38759 FLO9YAL063C 3969 nt3.53□□□□□ -1.84
VPS29P38759 RGR1YLR071C 3249 nt3.53□□□□□ -1.84
VPS29P38759 STE6YKL209C 3873 nt3.53□□□□□ -1.84
VPS29P38759 TAF1YGR274C 3201 nt3.53□□□□□ -1.84
VPS29P38759 YGL123C-AYGL123C-A 231 nt3.53□□□□□ -1.84
VPS29P38759 YPR108W-AYPR108W-A 213 nt3.53□□□□□ -1.84
VPS29P38759 COG6YNL041C 2520 nt3.53□□□□□ -1.84
VPS29P38759 MAK10YEL053C 2202 nt3.52□□□□□ -1.85
VPS29P38759 COG4YPR105C 2586 nt3.52□□□□□ -1.85
VPS29P38759 YDR464C-AYDR464C-A 189 nt3.52□□□□□ -1.85
VPS29P38759 PKH2YOL100W 3246 nt3.52□□□□□ -1.85
VPS29P38759 YIL082W-AYIL082W-A 4497 nt3.51□□□□□ -1.85
VPS29P38759 MDN1YLR106C 14733 nt3.51□□□□□ -1.85
VPS29P38759 YGR067CYGR067C 2415 nt3.51□□□□□ -1.85
VPS29P38759 OSH3YHR073W 2991 nt3.5□□□□□ -1.85
VPS29P38759 BUD4YJR092W 4344 nt3.5□□□□□ -1.85
VPS29P38759 SPT6YGR116W 4356 nt3.49□□□□□ -1.85
VPS29P38759 RPS26AYGL189C 360 nt3.49□□□□□ -1.85
VPS29P38759 ECM21YBL101C 3354 nt3.48□□□□□ -1.85
VPS29P38759 RTT107YHR154W 3213 nt3.48□□□□□ -1.85
VPS29P38759 MLH3YPL164C 2148 nt3.47□□□□□ -1.85
VPS29P38759 BUB1YGR188C 3066 nt3.47□□□□□ -1.85
VPS29P38759 GLG1YKR058W 1851 nt3.46□□□□□ -1.86
VPS29P38759 snR75snR75 89 nt3.46□□□□□ -1.86
VPS29P38759 YDR210WYDR210W 228 nt3.46□□□□□ -1.86
VPS29P38759 TFC4YGR047C 3078 nt3.46□□□□□ -1.86
VPS29P38759 SGM1YJR134C 2124 nt3.46□□□□□ -1.86
VPS29P38759 IST2YBR086C 2841 nt3.45□□□□□ -1.86
VPS29P38759 SMC6YLR383W 3345 nt3.45□□□□□ -1.86
VPS29P38759 RPA190YOR341W 4995 nt3.45□□□□□ -1.86
VPS29P38759 YGR109W-BYGR109W-B 4644 nt3.45□□□□□ -1.86
VPS29P38759 UFD2YDL190C 2886 nt3.44□□□□□ -1.86
VPS29P38759 YDL206WYDL206W 2289 nt3.44□□□□□ -1.86
VPS29P38759 BUD2YKL092C 3315 nt3.44□□□□□ -1.86
VPS29P38759 TBS1YBR150C 3285 nt3.44□□□□□ -1.86
VPS29P38759 FIR1YER032W 2631 nt3.42□□□□□ -1.86
VPS29P38759 STU2YLR045C 2667 nt3.42□□□□□ -1.86
VPS29P38759 tQ(UUG)BtQ(UUG)B 72 nt3.42□□□□□ -1.86
VPS29P38759 YBR196C-AYBR196C-A 150 nt3.42□□□□□ -1.86
VPS29P38759 snR47snR47 99 nt3.42□□□□□ -1.86
VPS29P38759 EAF1YDR359C 2949 nt3.41□□□□□ -1.86
VPS29P38759 SCP160YJL080C 3669 nt3.41□□□□□ -1.86
VPS29P38759 YGR146C-AYGR146C-A 162 nt3.41□□□□□ -1.86
VPS29P38759 YKL096C-BYKL096C-B 150 nt3.4□□□□□ -1.87
VPS29P38759 URA2YJL130C 6645 nt3.39□□□□□ -1.87
VPS29P38759 FRK1YPL141C 2598 nt3.39□□□□□ -1.87
VPS29P38759 SLI15YBR156C 2097 nt3.39□□□□□ -1.87
VPS29P38759 YBT1YLL048C 4986 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms