Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 MET5YJR137C 4329 nt3.8□□□□□ -1.8
RTG3P38165 TAF2YCR042C 4224 nt3.8□□□□□ -1.8
RTG3P38165 YDR034C-AYDR034C-A 177 nt3.8□□□□□ -1.8
RTG3P38165 YAL064W-BYAL064W-B 381 nt3.8□□□□□ -1.8
RTG3P38165 YDR186CYDR186C 2634 nt3.8□□□□□ -1.8
RTG3P38165 YIL169CYIL169C 2988 nt3.79□□□□□ -1.8
RTG3P38165 HMI1YOL095C 2121 nt3.78□□□□□ -1.8
RTG3P38165 snR53snR53 91 nt3.78□□□□□ -1.8
RTG3P38165 DGR2YKL121W 2559 nt3.77□□□□□ -1.81
RTG3P38165 CSR2YPR030W 3366 nt3.77□□□□□ -1.81
RTG3P38165 ENV11YGR071C 2583 nt3.76□□□□□ -1.81
RTG3P38165 PMR1YGL167C 2853 nt3.76□□□□□ -1.81
RTG3P38165 SNC1YAL030W 354 nt3.76□□□□□ -1.81
RTG3P38165 YLL020CYLL020C 306 nt3.76□□□□□ -1.81
RTG3P38165 SQS1YNL224C 2304 nt3.75□□□□□ -1.81
RTG3P38165 LHS1YKL073W 2646 nt3.75□□□□□ -1.81
RTG3P38165 VPS16YPL045W 2397 nt3.74□□□□□ -1.81
RTG3P38165 YPL216WYPL216W 3309 nt3.74□□□□□ -1.81
RTG3P38165 MGM1YOR211C 2646 nt3.74□□□□□ -1.81
RTG3P38165 YDR464C-AYDR464C-A 189 nt3.73□□□□□ -1.81
RTG3P38165 RPS22AYJL190C 393 nt3.73□□□□□ -1.81
RTG3P38165 VAS1YGR094W 3315 nt3.72□□□□□ -1.81
RTG3P38165 TSC11YER093C 4293 nt3.72□□□□□ -1.81
RTG3P38165 SRO77YBL106C 3033 nt3.72□□□□□ -1.81
RTG3P38165 YCR102W-AYCR102W-A 198 nt3.72□□□□□ -1.81
RTG3P38165 YDR521WYDR521W 336 nt3.72□□□□□ -1.81
RTG3P38165 RPO41YFL036W 4056 nt3.72□□□□□ -1.81
RTG3P38165 APL2YKL135C 2181 nt3.72□□□□□ -1.81
RTG3P38165 MMS1YPR164W 4224 nt3.71□□□□□ -1.81
RTG3P38165 HEF3YNL014W 3135 nt3.71□□□□□ -1.82
RTG3P38165 YIL156W-BYIL156W-B 222 nt3.71□□□□□ -1.82
RTG3P38165 PHO91YNR013C 2685 nt3.71□□□□□ -1.82
RTG3P38165 VMR1YHL035C 4779 nt3.71□□□□□ -1.82
RTG3P38165 DSE4YNR067C 3354 nt3.7□□□□□ -1.82
RTG3P38165 APL1YJR005W 2103 nt3.7□□□□□ -1.82
RTG3P38165 YBL039C-AYBL039C-A 84 nt3.7□□□□□ -1.82
RTG3P38165 YOL083C-AYOL083C-A 141 nt3.7□□□□□ -1.82
RTG3P38165 YBR072C-AYBR072C-A 162 nt3.7□□□□□ -1.82
RTG3P38165 MLH1YMR167W 2310 nt3.7□□□□□ -1.82
RTG3P38165 SAP190YKR028W 3102 nt3.69□□□□□ -1.82
RTG3P38165 GCV2YMR189W 3105 nt3.69□□□□□ -1.82
RTG3P38165 NFT1YKR103W 3657 nt3.69□□□□□ -1.82
RTG3P38165 ENA5YDR038C 3276 nt3.68□□□□□ -1.82
RTG3P38165 RAX2YLR084C 3663 nt3.68□□□□□ -1.82
RTG3P38165 NEW1YPL226W 3591 nt3.68□□□□□ -1.82
RTG3P38165 ACB1YGR037C 264 nt3.68□□□□□ -1.82
RTG3P38165 YOR394C-AYOR394C-A 168 nt3.68□□□□□ -1.82
RTG3P38165 ALK1YGL021W 2283 nt3.68□□□□□ -1.82
RTG3P38165 VTC3YPL019C 2508 nt3.68□□□□□ -1.82
RTG3P38165 NOP14YDL148C 2433 nt3.68□□□□□ -1.82
RTG3P38165 CDC53YDL132W 2448 nt3.66□□□□□ -1.82
RTG3P38165 COG6YNL041C 2520 nt3.66□□□□□ -1.82
RTG3P38165 PSK1YAL017W 4071 nt3.65□□□□□ -1.82
RTG3P38165 RSE1YML049C 4086 nt3.65□□□□□ -1.82
RTG3P38165 YBL071C-BYBL071C-B 99 nt3.65□□□□□ -1.83
RTG3P38165 MET6YER091C 2304 nt3.65□□□□□ -1.83
RTG3P38165 SWR1YDR334W 4545 nt3.65□□□□□ -1.83
RTG3P38165 SPO14YKR031C 5052 nt3.65□□□□□ -1.83
RTG3P38165 RGR1YLR071C 3249 nt3.65□□□□□ -1.83
RTG3P38165 SDC25YLL016W 3147 nt3.64□□□□□ -1.83
RTG3P38165 YPP1YGR198W 2454 nt3.64□□□□□ -1.83
RTG3P38165 TFC4YGR047C 3078 nt3.64□□□□□ -1.83
RTG3P38165 DCP2YNL118C 2913 nt3.64□□□□□ -1.83
RTG3P38165 BFR2YDR299W 1605 nt3.62□□□□□ -1.83
RTG3P38165 UBP15YMR304W 3693 nt3.62□□□□□ -1.83
RTG3P38165 COX5BYIL111W 456 nt3.61□□□□□ -1.83
RTG3P38165 BIR1YJR089W 2865 nt3.61□□□□□ -1.83
RTG3P38165 YPL150WYPL150W 2706 nt3.61□□□□□ -1.83
RTG3P38165 YSP2YDR326C 4317 nt3.6□□□□□ -1.83
RTG3P38165 STU1YBL034C 4542 nt3.6□□□□□ -1.83
RTG3P38165 RPA190YOR341W 4995 nt3.6□□□□□ -1.83
RTG3P38165 tM(CAU)Q2tM(CAU)Q2 78 nt3.6□□□□□ -1.83
RTG3P38165 RPL37BYDR500C 267 nt3.59□□□□□ -1.83
RTG3P38165 YBL100W-CYBL100W-C 120 nt3.59□□□□□ -1.83
RTG3P38165 UBP1YDL122W 2430 nt3.58□□□□□ -1.84
RTG3P38165 FYV10YIL097W 1551 nt3.58□□□□□ -1.84
RTG3P38165 BUD4YJR092W 4344 nt3.58□□□□□ -1.84
RTG3P38165 SIN3YOL004W 4611 nt3.57□□□□□ -1.84
RTG3P38165 KAP120YPL125W 3099 nt3.56□□□□□ -1.84
RTG3P38165 POL2YNL262W 6669 nt3.56□□□□□ -1.84
RTG3P38165 YJR039WYJR039W 3366 nt3.56□□□□□ -1.84
RTG3P38165 SAP185YJL098W 3177 nt3.55□□□□□ -1.84
RTG3P38165 tW(CCA)G1tW(CCA)G1 72 nt3.55□□□□□ -1.84
RTG3P38165 tW(CCA)G2tW(CCA)G2 72 nt3.55□□□□□ -1.84
RTG3P38165 tW(CCA)JtW(CCA)J 72 nt3.55□□□□□ -1.84
RTG3P38165 tW(CCA)KtW(CCA)K 72 nt3.55□□□□□ -1.84
RTG3P38165 tW(CCA)MtW(CCA)M 72 nt3.55□□□□□ -1.84
RTG3P38165 tW(CCA)PtW(CCA)P 72 nt3.55□□□□□ -1.84
RTG3P38165 ROM1YGR070W 3468 nt3.55□□□□□ -1.84
RTG3P38165 YAL042C-AYAL042C-A 378 nt3.54□□□□□ -1.84
RTG3P38165 SEC1YDR164C 2175 nt3.53□□□□□ -1.84
RTG3P38165 YGR067CYGR067C 2415 nt3.53□□□□□ -1.84
RTG3P38165 YGR109W-BYGR109W-B 4644 nt3.53□□□□□ -1.84
RTG3P38165 TAH1YCR060W 336 nt3.53□□□□□ -1.84
RTG3P38165 SLN1YIL147C 3663 nt3.53□□□□□ -1.84
RTG3P38165 YBT1YLL048C 4986 nt3.53□□□□□ -1.84
RTG3P38165 EAF1YDR359C 2949 nt3.53□□□□□ -1.84
RTG3P38165 FIR1YER032W 2631 nt3.53□□□□□ -1.84
RTG3P38165 YGL123C-AYGL123C-A 231 nt3.52□□□□□ -1.85
RTG3P38165 YGR240C-AYGR240C-A 201 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 35.7 ms