Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PTPN6P29350 AC010536.3-201ENST00000620306 533 ntBASIC19.1■□□□□ 0.65
PTPN6P29350 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTPN6P29350 DPP3P2-201ENST00000416030 1696 ntBASIC19.1■□□□□ 0.65
PTPN6P29350 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN6P29350 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN6P29350 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTPN6P29350 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPN6P29350 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTPN6P29350 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPN6P29350 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN6P29350 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN6P29350 AL158211.5-201ENST00000623583 2518 ntBASIC19.09■□□□□ 0.65
PTPN6P29350 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN6P29350 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN6P29350 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN6P29350 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTPN6P29350 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PTPN6P29350 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPN6P29350 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPN6P29350 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PTPN6P29350 AC231657.2-201ENST00000624556 255 ntBASIC19.08■□□□□ 0.64
PTPN6P29350 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPN6P29350 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
PTPN6P29350 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN6P29350 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN6P29350 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN6P29350 BX119927.1-201ENST00000636596 1552 ntBASIC19.07■□□□□ 0.64
PTPN6P29350 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN6P29350 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN6P29350 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN6P29350 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN6P29350 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN6P29350 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PTPN6P29350 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN6P29350 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN6P29350 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPN6P29350 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPN6P29350 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
PTPN6P29350 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN6P29350 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PTPN6P29350 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PTPN6P29350 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN6P29350 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN6P29350 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN6P29350 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PTPN6P29350 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN6P29350 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PTPN6P29350 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN6P29350 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN6P29350 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN6P29350 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PTPN6P29350 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PTPN6P29350 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN6P29350 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PTPN6P29350 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.06■□□□□ 0.64
PTPN6P29350 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 TERF1P5-201ENST00000477545 1207 ntBASIC19.06■□□□□ 0.64
PTPN6P29350 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
PTPN6P29350 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN6P29350 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN6P29350 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN6P29350 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms