Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 BX119927.1-201ENST00000636596 1552 ntBASIC18.67■□□□□ 0.58
TNFRSF1BP20333 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFRSF1BP20333 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 UBE2DNL-204ENST00000602536 740 ntBASIC18.65■□□□□ 0.58
TNFRSF1BP20333 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFRSF1BP20333 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.64■□□□□ 0.58
TNFRSF1BP20333 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNFRSF1BP20333 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNFRSF1BP20333 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNFRSF1BP20333 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TNFRSF1BP20333 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 FAM21FP-204ENST00000608637 956 ntBASIC18.64■□□□□ 0.57
TNFRSF1BP20333 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TNFRSF1BP20333 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF1BP20333 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms